Pairwise Alignments

Query, 1037 a.a., AcrB/AcrD/AcrF family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1029 a.a., Multidrug resistance protein MdtC from Xanthobacter sp. DMC5

 Score =  572 bits (1474), Expect = e-167
 Identities = 330/1008 (32%), Positives = 545/1008 (54%), Gaps = 9/1008 (0%)

Query: 22   VAAYFINNRVISWMVSLIFLIGGTAAFFNLGRLEDPAFTIKDAMVVTSYPGATPQQVEEE 81
            ++A+ + +R +   +  I ++ G  AF NLGR EDP F IK  +V  ++PGAT ++   +
Sbjct: 7    LSAWALKHRSVIIYLMAISVVAGVMAFRNLGRAEDPTFVIKTMVVQANWPGATLEETFRQ 66

Query: 82   VTYPLEKAIQQLTYVDEVNSISSRGLSQITVTMKNNYGPDDLPQIWDELRRKVNDLKGAL 141
            VT  LE+ +Q+   ++ + S +  G++ + V +K +    ++P IW  +R+ + D++  L
Sbjct: 67   VTERLERKLQETPQLNFLESYTKPGVTTVFVHLKGSATAAEVPDIWYHVRKSIADIRHTL 126

Query: 142  PPGVNPPLVIDDFGDVYGILLAVTGEGYSYKELLDYVDYLRRELELIDGVSKVSVSGQQQ 201
            P G+  P   D+FGD +GI+   T +G+S++EL DYV+  R EL  +  VSK+ + G Q 
Sbjct: 127  PQGIVGPFFNDEFGDTFGIIYGFTADGFSHRELRDYVEEARSELLHVPDVSKIEILGAQD 186

Query: 202  EQVFIEISMKRISTLGISPQTVFNLLSTQNLVSDAGAIRIGSEYIRIHPTGEFDDVEKLG 261
            E++FIE SM+ +++LGI  Q V + L+ QN+V  +G I+ G E I I  +G F     + 
Sbjct: 187  ERIFIEFSMQELASLGIDRQAVLSALAAQNIVRPSGEIQTGKENISIRVSGAFASEADIA 246

Query: 262  DLILSERGAQGLIYLRDVAEVKRGYVEVPSNVITFNGKLALNVGVSFAQGVNVVEVGQRF 321
            ++ L+  G   LI L D+A ++RG+ + P  +   NGK A+ + ++   G +++ +G   
Sbjct: 247  NVNLAVNGR--LIRLADIATIRRGFADPPQPMFRVNGKDAIGLAIAMRDGGDILAMGANI 304

Query: 322  DRRLAELKYQQPIGIDIAEVYSQPKEVDKSVSGFVVSLGQAVAIVIIVLLFFMGLRSGLL 381
            DR +  +    P+GID   V  Q   V  ++S F+ SL QAV I+++V    +G+R+G +
Sbjct: 305  DRAMTRILANMPVGIDATLVADQAVTVKSAISEFMESLWQAVGIILVVSFIALGVRAGAI 364

Query: 382  IGLILLLTVLGTFIFMQYFKIDLQRISLGALVIALGMLVDNAIVVVEGILIGTQKGRTRL 441
            + L + LT+   F  MQ   ID+QRISLGAL+IAL ++VD+A+   +  L     G    
Sbjct: 365  VALAIPLTLAIVFALMQLAHIDMQRISLGALIIALALMVDDAMTTTDATLTRLAAGDDPP 424

Query: 442  QAATDIVTQTKWPLLGATVIAVTAFAPIGLSEDATGEYCGTLFTVLLISLMLSWFTAISL 501
             AA+         +L  T++ V  F P+G +  + GEY  TLF V+ I+L++SW  A+  
Sbjct: 425  TAASYAFKAYAAAMLAGTLVTVAGFVPVGFAASSAGEYTFTLFAVVAIALLVSWIVAVLF 484

Query: 502  TPFFADLFFRGQKAPASGEESDPYQGFIFVVYRRFLEFCMRRAWLTMGVLVLGLAASLYG 561
             P    L  R        + + P +G +  +YR FL  C+R  W+T+ V       S+  
Sbjct: 485  APLLQVLILRAPAKDKIPDPNAPPKG-VMGMYRAFLILCLRLRWVTLAVTAGLFVLSVLA 543

Query: 562  FTKVKQAFFPSSTTPMFMVDVWMPEGTDIRATDAILLELEKWLSAQESVDSVTTTAGKGL 621
               + + FFPSS  P  +VD+  P+   I A+ ++    +K L+    V   +T  G+G 
Sbjct: 544  LPLIPRQFFPSSDRPELLVDLASPQNASIYASQSVAEAFDKVLANDPDVARWSTYVGRGA 603

Query: 622  QRFMLTYSPEKSYAAYGEITTRVTDYQQLAALMARFRAHLDARYPQINYKLKQIELGPGG 681
             RF L    +     + +      D      L  +    L   +PQ+  ++  +ELGP  
Sbjct: 604  IRFYLPLDVQLPNDFFAQSVIVAKDVAARERLRVKLEKVLATDFPQLVARISPLELGPPV 663

Query: 682  GAKIEARIVGSDPTVLRSIAAQVMDVMYADPGAYNIRHDWRERTKVLEPQFNESQARRYG 741
            G  ++ R+ G +   +R+IA  +  VM  +P    + ++W E  + +  + ++ +AR  G
Sbjct: 664  GWPVQYRVSGPEIEKVRAIAFDLAKVMAENPQVETVNYNWIEPARQVSIRVDQDEARLLG 723

Query: 742  ITKADVDEFLAMSFSGKTIGVYRDGTTLMPIVARLPEEERVDIRNIEGMKIWSPALSEYI 801
            ++ A +   L    SG+ +   RD   L+ +VAR  +EERV + ++  +++  P     +
Sbjct: 724  LSTAQLAGVLNTVLSGQPVTQVRDDIYLVNVVARATDEERVSLSSLATLQVPLPG-GRTV 782

Query: 802  PLQQVTLGYEMRWEDPLIVRKNRKRMLTVMADPDLLGEETAATLQQRLQPQIEAI--PLP 859
            PL Q+   +E   + P I R++R   LTV +  D+       ++ ++L P+IEA+   LP
Sbjct: 783  PLSQIAT-FEYGQDYPAIWRRDRVPTLTVQS--DVKRGVLPESVVEKLDPKIEALRRTLP 839

Query: 860  PGYFLEWGGEYESSGDAKASLFKTMPLGYLFMFLITVFLFNSVKESLIVWLTVPLAVIGV 919
             GY +  GG  E S  + AS+   +P+  L MF + +F   S +  +IV    PL +IGV
Sbjct: 840  AGYAITTGGTVEESASSLASVVAVVPVMLLLMFTVLMFELKSFQRLVIVLSVAPLGLIGV 899

Query: 920  TTGLLALNTPFGFMALLGFLSLSGMLLKNGIVLLDQIEIEMHSGKDPYLAVVDASLSRVR 979
               LL    P GF+A+LG L+L GM+ KN ++L+ QIE +  +GK  + AVV  S  R R
Sbjct: 900  VGALLLSGRPLGFVAILGVLALIGMITKNAVILIGQIEADRAAGKTVWDAVVSGSSMRFR 959

Query: 980  PVCMAAVTTILGMIPLLPDIFFRPMAVTIMFGLGFATVLTLIVVPVLY 1027
            P+ + AV+T+LGMIP+ P +F+ PMA  IM GL   T+LTLI +P LY
Sbjct: 960  PIMLTAVSTVLGMIPIAPTVFWGPMAFAIMGGLLVGTLLTLIFLPALY 1007