Pairwise Alignments

Query, 1037 a.a., AcrB/AcrD/AcrF family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1070 a.a., Cobalt/zinc/cadmium efflux RND transporter, transmembrane protein CzcA from Variovorax sp. SCN45

 Score =  293 bits (751), Expect = 3e-83
 Identities = 264/1052 (25%), Positives = 479/1052 (45%), Gaps = 80/1052 (7%)

Query: 34   WMVSLIFLIGGTAAFFNLGRLED---PAFTIKDAMVVTSYPGATPQQVEEEVTYPLEKAI 90
            W++ L  L       F+  +L     P  T     + T+ PG +P + E+ VTYP+E  +
Sbjct: 14   WLILLAVLGMAALGIFSYQKLPIDAVPDITNVQVQINTAAPGYSPLETEQRVTYPIETVM 73

Query: 91   QQLTYVDEVNSISSRGLSQITVTMKNNYGPDDLPQIWDELRRKVNDLKGALPPGVNPPL- 149
              L  + +  S+S  GLSQ+TV  K+        Q+ +E   ++   + ++P G++P + 
Sbjct: 74   AGLPGLQQTRSLSRYGLSQVTVIFKDGTDIYFARQLVNE---RIQSARESMPRGISPVIG 130

Query: 150  -VIDDFGDVYGILLAVT-------GEGYSYKELLDYVDYL-RRELELIDGVSKVSVSGQQ 200
             +    G++Y   +          G+ YS  +L +  D++ + +L  + GV++++  G  
Sbjct: 131  PISTGLGEIYLWTVEAEEGARKADGKPYSSTDLREIQDWIIKPQLRNVAGVTEINSIGGY 190

Query: 201  QEQVFIEISMKRISTLGISPQTVFNLLSTQNLVSDAGAIRIGSEYIRIHPTGEFDDVEKL 260
             ++  I     ++   G++   +   L   N    AG I    E   I   G+   VE +
Sbjct: 191  AKEFQISPDPAKLLAHGLTMTDLVTALERNNANVGAGYIEKRGEQYLIRAPGQVKSVEDI 250

Query: 261  GDLILSERGAQGL-IYLRDVAEVKRGYVEVPSNVITFNGKLALNVGVSFAQGVNVVEVGQ 319
            G++IL    A G+ + ++DVAEV  G  E+ +   T NG+  +   V    G N   V Q
Sbjct: 251  GNVILGN--ANGIPLRVQDVAEVGIGK-ELRTGAATDNGREVVLGTVFMLIGENSRTVSQ 307

Query: 320  RFDRRLAELKYQQPIGIDIAEVYSQPKEVDKSVSGFVVSLGQAVAIVIIVLLFFMG-LRS 378
              DR++ E+    P G+    VY +   VDK+++    +L +   +VI +L  F+G +R+
Sbjct: 308  AVDRKMQEINRTLPAGVKAVTVYDRTVLVDKAIATVKKNLFEGAVLVIAILFLFLGNIRA 367

Query: 379  GLLIGLILLLTVLGTFIFMQYFKIDLQRISLGALVIALGMLVDNAIVVVEGIL-----IG 433
             L+  L++ L++L TF  M   K+    +SLGAL    G+++D A+V+VE  +       
Sbjct: 368  ALITALVIPLSMLFTFTGMVNQKVSANLMSLGAL--DFGIIIDGAVVIVENCVRRLAHAQ 425

Query: 434  TQKGR--TRLQAATDIVT---QTKWPLLGATVIAVTAFAPIGLSEDATGEYCGTLFTVLL 488
              KGR  TR +   ++     + + PLL   +I +  + PI       G+    +   ++
Sbjct: 426  AHKGRPLTRSERFHEVFAASQEARRPLLFGQLIIMIVYLPIFALTGVEGKLFHPMAFTVV 485

Query: 489  ISLMLSWFTAISLTPFFADLFFRGQKAPASGEESDPYQGFIFVVYRRFLEFCMRRAWLTM 548
            I+L+ +   +I+  P    LF  G K     E+ +    +    Y   L   M    L +
Sbjct: 486  IALLGAMILSITFIPAAVALFI-GNKV---SEKENRLMVWAKRGYEPLLARVMGAKPLVI 541

Query: 549  GVLVLGLAASLYGFTKVKQAFFPSSTTPMFMVDVWMPEGTDIRATDAILLELEKWLSAQ- 607
               V+ +  S    T++   F PS +   F +      GT +  +  +  +LE+ L  + 
Sbjct: 542  TTAVVAVLLSGLLATRLGTEFVPSLSEGDFAIQALRIPGTSLTQSVEMQKQLERTLKEKF 601

Query: 608  ---ESVDSVTTTAG-------KGLQRFMLTYSPEKSYAAYGEITTRVTDYQQLAALMARF 657
               E + + T TA          +    +   PE  +        R +  + LAA+    
Sbjct: 602  PEIERIFARTGTAEIASDPMPPNISDGYIMLKPESEWPK-----PRRSRAEVLAAVQEEV 656

Query: 658  RAHLDARYPQINYKLKQI------ELGPGGGAKIEARIVGSDPTVLRSIAAQVMDVMYAD 711
                  + P  NY+  Q       EL  G  + +  +I G D  VL   AA+V + +   
Sbjct: 657  E-----KLPGNNYEFSQPIQLRFNELISGVRSDVAVKIFGDDMDVLNKTAAEVSEALGKI 711

Query: 712  PGAYNIRHDWRERTKVLEPQFNESQARRYGITKADVDEFLAMSFSGKTIGVYRDGTTLMP 771
             GA  ++ +      +L    + ++  RYG+   DV E ++++  G+  G   DG     
Sbjct: 712  AGAAEVKVEQTTGLPMLTVNIDRNKTARYGLNVGDVQEAISIAVGGREAGTLFDGDRRFD 771

Query: 772  IVARLPEEERVDIRNIEGMKIWSP-------ALSEYIPLQQVTLGYEMRWEDPLIVRKNR 824
            I+ RLPE  R D+  I+ + +  P       A + +IPL +V    ++      + R++ 
Sbjct: 772  IIVRLPENLRTDLEAIKRLPVALPKGAGAEGARTSFIPLGEVAT-LDIAPGPNQVSREDG 830

Query: 825  KRMLTVMADPDLLGEETAATLQQRLQPQIEAIPLPPGYFLEWGGEYESSGDAKASLFKTM 884
            KR + V A+  + G +  + + +  +  +  + +P GY+  WGG+YE+   A   L   +
Sbjct: 831  KRRIVVSAN--VRGRDLGSFVAEA-EEAMRNVKIPTGYWTVWGGQYENLASATQRLQVVV 887

Query: 885  PLGYLFMFLITVFLFNSVKESLIVWLTVPLAVIGVTTGLLALNTPFGFMALLGFLSLSGM 944
            P+  L +F +   +F ++K+ L+V+  +P A+ G    L     P    A +GF++LSG+
Sbjct: 888  PVSLLLVFTLLFAMFGNLKDGLLVFTGIPFALTGGIVALWMRGIPLSISAAVGFIALSGV 947

Query: 945  LLKNGIVLLDQIEIEMHSGKDPYLAVVDASLSRVRPVCMAAVTTILGMIPLLPDI----- 999
             + NG+V++  I      G     A+ + +L+R+RPV M A+   LG +P+         
Sbjct: 948  AVLNGLVMISFIRNLREGGLPLDAAIREGALTRLRPVLMTALVASLGFVPMAIATGTGAE 1007

Query: 1000 FFRPMAVTIMFGLGFATVLTLIVVPVLYRLFH 1031
              RP+A  ++ G+  +T LTL+V+P+LYR+ H
Sbjct: 1008 VQRPLATVVIGGILSSTALTLLVLPLLYRIAH 1039



 Score = 33.9 bits (76), Expect = 6e-05
 Identities = 35/161 (21%), Positives = 69/161 (42%), Gaps = 4/161 (2%)

Query: 365  IVIIVLLFFM--GLRSGLLIGLILLLTVLGTFIFMQYFKIDLQRISLGALVIALGMLVDN 422
            +++  LLF M   L+ GLL+   +   + G  + +    I L   +    +   G+ V N
Sbjct: 892  LLVFTLLFAMFGNLKDGLLVFTGIPFALTGGIVALWMRGIPLSISAAVGFIALSGVAVLN 951

Query: 423  AIVVVEGILIGTQKGRTRLQAATDIVTQTKW-PLLGATVIAVTAFAPIGLSEDATGEYCG 481
             +V++  I    ++G   L AA      T+  P+L   ++A   F P+ ++     E   
Sbjct: 952  GLVMISFIR-NLREGGLPLDAAIREGALTRLRPVLMTALVASLGFVPMAIATGTGAEVQR 1010

Query: 482  TLFTVLLISLMLSWFTAISLTPFFADLFFRGQKAPASGEES 522
             L TV++  ++ S    + + P    +  R  +  A  E++
Sbjct: 1011 PLATVVIGGILSSTALTLLVLPLLYRIAHRRDEEEAQQEDT 1051