Pairwise Alignments

Query, 1037 a.a., AcrB/AcrD/AcrF family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1051 a.a., Cation/multidrug efflux pump from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  281 bits (720), Expect = 1e-79
 Identities = 243/1004 (24%), Positives = 460/1004 (45%), Gaps = 47/1004 (4%)

Query: 57   PAFTIKDAMVVTSYPGATPQQVEEEVTYPLEKAIQQLTYVDEVNSISSRGLSQITVTMKN 116
            P F+     V T YPGA P +VE  VT  LE A+  L  +D + S S    S IT+ + +
Sbjct: 38   PKFSPNVVTVSTVYPGAAPSEVENSVTRKLEDALASLEGIDVMKSTSLESFSIITIELDD 97

Query: 117  NYGPDDLPQIWDELRRKVNDLKGALPPGVNPPLVIDDFGDVYGILLAVTGEGYSYKELLD 176
            +    D+  I  + +R ++ + G LP  V+PP +     D   I+        +  +  D
Sbjct: 98   DV---DVDLILQDAQRDIDAVLGDLPEDVDPPSLGKFSLDDMPIMQMGAYSNLTATDFYD 154

Query: 177  YVDY-LRRELELIDGVSKVSVSGQQQEQVFIEISMKRISTLGISPQTVFNLLSTQNLVSD 235
             +D  ++  +  IDGV++V++ G  + ++ + +   +++T GISP  V   ++  NL   
Sbjct: 155  LMDQRIQPMISQIDGVAQVNLLGGAEREIKVNLDQNKLNTYGISPLQVNQAIAQANLDFP 214

Query: 236  AGAIRIGSEYIRIHPTGEFDDVEKLGDLILSERGAQGLIYLRDVAEVKRGYVEVPSN--- 292
             G ++   E I I   G+F  V+++G+LI+S       I ++DVAEV      V SN   
Sbjct: 215  TGKLKSDKEQILIRLAGKFTQVDEIGELIVSYADGSP-IKIKDVAEV------VDSNKDE 267

Query: 293  --VITFNGKLALNVGVSFAQGVNVVEVGQRFDRRLAELKYQQPIGIDIA-EVYSQPKEVD 349
              +   NG  A+ + +      N V+V +R ++ LA+L+     G D+  E+     E  
Sbjct: 268  EILSRLNGNSAIGISIQKQSDANAVDVAERVNKALAQLETTYA-GDDLRFEISQDSSEFT 326

Query: 350  KSVSGFVVS--LGQAVAIVIIVLLFFMGLRSGLLIGLILLLTVLGTFIFMQYFKIDLQRI 407
               +  V+   +   V + +I+LLF    R+ +++ + + ++++ TF  M      L  +
Sbjct: 327  LEAANAVIHDLIIAVVLVAVIMLLFLHSFRNAVIVMIAVPMSIIATFTVMYLAGFTLNLM 386

Query: 408  SLGALVIALGMLVDNAIVVVEGILIGTQKGRTRLQAATDIVTQTKWPLLGATVIAVTAFA 467
            SL AL + +G+LVD+AIVV+E I    +KG++ +QA+ D + +    +   T++ V  F 
Sbjct: 387  SLLALSLVVGILVDDAIVVIENIYRHMEKGKSAIQASYDGIREIGGTVTSITLVIVVVFV 446

Query: 468  PIGLSEDATGEYCGTLFTVLLISLMLSWFTAISLTPFFADLFFRGQKA-PAS--GEESDP 524
            P+ ++              + ++ M+S   A +L P     F + +   P S  G+  + 
Sbjct: 447  PLSMTGGLISGILTQFSITVAVATMMSLLVAFTLIPLLTSRFSKLEHLDPKSIFGKIVNG 506

Query: 525  YQGFI--FVVYRR-FLEFCMRRAWLTMGVLVLGLAAS--LYGFTKVKQAFFPSSTTPMFM 579
            ++GF+  FV +    L++      +T+    +   +S  L G+  +   F        F+
Sbjct: 507  FEGFLDAFVAWLTGILKWSFNHKIITLVATFVLFVSSFMLVGYGFIGSEFVSQGDKGEFI 566

Query: 580  VDVWMPEGTDIRATDAILLELEKWLSAQESVDSVTTTAGKGLQRFMLTYSPEKSYAAYGE 639
            + + +P+   +  T+    E E +L+    V SV TT G+      ++ S    YA+  E
Sbjct: 567  MRLELPKSATLEETNFTTREAENFLTKNPMVTSVFTTVGQTTGS--MSGSQSTPYAS--E 622

Query: 640  ITTRVTDYQQLAALMARFRAHLDARYPQ--INYKLKQIELGPGGGAK---IEARIVGSDP 694
            IT ++ D ++       F   ++    +  +  +   + +G  G A    I+  + G D 
Sbjct: 623  ITVKMVDGKKRNLTAPEFAREMEIALEENIVGAEFTAVPIGITGTANDAPIQIVLSGPDL 682

Query: 695  TVLRSIAAQVMDVMYADPGAYNIRHDWRERTKVLEPQFNESQARRYGITKADVDEFLAMS 754
              L+S + +V+  +   PG    +    +    +  + + ++    G+  A V   + ++
Sbjct: 683  DTLKSFSQRVLAEVEKVPGTRKAQTSLEDGNPEIRVEVDRAKMSDLGLDMAMVGGTMQVA 742

Query: 755  FSGKTIGVYRDGTTLMPIVARLPEEERVDIRNIEGMKIWSPALSEYIPLQQVTLGYEMRW 814
            F+G T   YRDG     I  R+ E +R  + +IE +   +    + + L+Q         
Sbjct: 743  FNGNTDTKYRDGDYEYDINIRMDEFDRKSVADIENLAFVNTK-GQTVLLKQFAKAIPSEG 801

Query: 815  EDPLIVRKNRKRMLTVMADPDLLGEETAATLQQRLQPQIEAIPLPPGYFLEWGGEYESSG 874
               L    NR+  +T +     +    + T+   +Q +I  + LP    + + G+ +   
Sbjct: 802  PSEL----NRQDRITSVTVQSQVSGRPSGTVGTEIQERIAKLDLPKEVTVAYEGDMKMQE 857

Query: 875  DAKASLFKTMPLGYLFMFLITVFLFNSVKESLIVWLTVPLAVIGVTTGLLALNTPFGFMA 934
            +   SL   +    L ++LI V L+++    L+V  ++PLAVIG    L    +     +
Sbjct: 858  EGFGSLGVALLASILLIYLIMVALYDNYVFPLVVMFSLPLAVIGALLALAMSGSALSIFS 917

Query: 935  LLGFLSLSGMLLKNGIVLLDQIEIEMHSGKDPYLAVVDASLSRVRPVCMAAVTTILGMIP 994
            +LG + L G++ KN I+L+D       +G +   A+V A   R RP+ M  +  + GM+P
Sbjct: 918  ILGLIMLMGLVAKNAILLVDFTNQLKAAGLEVKAALVKAVEIRFRPILMTTLAMVFGMLP 977

Query: 995  L-----LPDIFFRPMAVTIMFGLGFATVLTLIVVPVLYRLFHHV 1033
            +         +   +A  ++ GL  +  LT++VVPV+Y +F  +
Sbjct: 978  IALASGAGAEWKNGLAWALIGGLISSMFLTMVVVPVIYYIFDRI 1021