Pairwise Alignments

Query, 1037 a.a., AcrB/AcrD/AcrF family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1041 a.a., efflux RND transporter permease subunit from Phocaeicola dorei CL03T12C01

 Score =  612 bits (1577), Expect = e-179
 Identities = 357/1045 (34%), Positives = 576/1045 (55%), Gaps = 40/1045 (3%)

Query: 22   VAAYFINNRVISWMVSLIFLIGGTAAFFNLGRLEDPAFTIKDAMVVTSYPGATPQQVEEE 81
            ++ +   NR + + +  + L GG  + + + +LEDP   +K AMVVT+YPGA+  QVE E
Sbjct: 3    ISKWAFRNRNLIYFLIAVLLFGGAYSCYQMSKLEDPEIKVKLAMVVTTYPGASAHQVELE 62

Query: 82   VTYPLEKAIQQLTYVDEVNSISSRGLSQITVTMKNNYGPDDLPQIWDELRRKVNDLKGAL 141
            VT  LEK I+ +  +D + S S   LS I + + +    D++ Q WD LR KV+D    L
Sbjct: 63   VTDVLEKNIRTMGNIDNIESYSYNDLSLIQIELLSTVPDDEVEQCWDMLRHKVSDAHALL 122

Query: 142  PPGVNPPLVIDDFGDVYGILLAVTGEGYSYKELLDYVDYLRRELELIDGVSKVSVSGQQQ 201
            P G   P+V DDFG+VYG+  A+TG+G S +EL DY + ++RE+  ++GV +V + G++ 
Sbjct: 123  PEGATTPIVKDDFGNVYGMFYALTGDGLSDRELSDYAELVKREVNELEGVDRVELYGKRS 182

Query: 202  EQVFIEISMKRISTLGISPQTVFNLLSTQNLVSDAGAIRIGSEYIRIHPTGEFDDVEKLG 261
            E + I +   R++ LG+ P  V   L+ QN  +  G    G   IR+    +F  VE +G
Sbjct: 183  ECINISLLQDRMANLGVKPAEVLATLNGQNKTTYTGYYENGDNRIRVTVNDKFKTVEDIG 242

Query: 262  DLILSERGAQGLIYLRDVAEVKRGYVEVPSNVITFNGKLALNVGVSFAQGVNVVEVGQRF 321
             +++       L  L D+A +++ Y +   N + ++ + AL + ++ + G ++++VG   
Sbjct: 243  KMLVQGHDDDQL-RLSDIARIEKDYEDPTRNEMFYDHERALGILIAASSGSDIIKVGHAV 301

Query: 322  DRRLAELKY-QQPIGIDIAEVYSQPKEVDKSVSGFVVSLGQAVAIVIIVLLFFMGLRSGL 380
            + +L ELK  + P G++  +++ QP+ V  S+  FV++L ++V IV+++L+  MG +SGL
Sbjct: 302  ESKLEELKTGRLPAGVECHKIFYQPERVGSSLGTFVINLIESVIIVVLILMIAMGFKSGL 361

Query: 381  LIGLILLLTVLGTFIFMQYFKIDLQRISLGALVIALGMLVDNAIVVVEGILIGTQKGRTR 440
            +IG+ L++TV G+F+F+      +QR+SL A V+A+GMLVDNAIV+++GIL+  + G+ R
Sbjct: 362  IIGISLIITVFGSFLFLYSAGGTMQRVSLAAFVLAMGMLVDNAIVIIDGILVDLKAGKKR 421

Query: 441  LQAATDIVTQTKWPLLGATVIAVTAFAPIGLSEDATGEYCGTLFTVLLISLMLSWFTAIS 500
            ++A T I  QT  PLLGAT+IA+ AF PI +S D  G Y   LF VL +SL+LSW  A+ 
Sbjct: 422  MEAMTAIGRQTAMPLLGATLIAIIAFLPIYMSPDTAGVYTRDLFIVLAVSLLLSWVLALI 481

Query: 501  LTPFFADLFFRGQKAPASGEESD---PYQGFIFVVYRRFLEFCMRRAWLTMGVLVLGLAA 557
              P  AD     +  PA   +S     Y+G I+   R  L F +   W  +  ++  L  
Sbjct: 482  HVPLMAD----RRLHPAIDTDSTGKRVYKGKIYAGLRSALRFGLAHRWSFVFTMIGLLLL 537

Query: 558  SLYGFTKVKQAFFPSSTTPMFMVDVWMPEGTDIRATDAILLELEKWLSAQESVDSVTTTA 617
            S +G+  ++Q FFP        ++  +PEG +       L E+E +L  ++ +  VTT+ 
Sbjct: 538  SAFGYPYMRQGFFPDMVYDQLYMEYKLPEGNNHTRVAQDLKEIETYLKGRKEITHVTTSI 597

Query: 618  GKGLQRFMLTYSPEKSYAAYGEITTRVTDYQQLAALMARFRAHLDARYPQINYKLKQIEL 677
            G    R+ L  S      +YGE+    T  + L   +   +A+L   YP    KLK+  L
Sbjct: 598  GGTPGRYNLVRSVANPSLSYGELIIDFTSPETLVEHIDEIQAYLSQAYPDAYIKLKRYNL 657

Query: 678  GPGGGAKIEARIVGSDPTVLRSIAAQVMDVMYADPGAYNIRHDWRERTKVLEPQFNESQA 737
                   IEA+ +G DP VL  +A     +M   P    I  DW  +  VL  ++++  A
Sbjct: 658  -MFKKYPIEAQFLGPDPAVLHQLADSARTIMENTPEVCLITTDWEPQVPVLTIEYDQPSA 716

Query: 738  RRYGITKADVDEFLAMSFSGKTIGVYRDGTTLMPIVARLPEEERVDIRNIEGMKIWS--P 795
            R  G+++ DV   L  +  G  IG + +G     I  +  +E+   I ++   +++S  P
Sbjct: 717  RALGLSRNDVSLSLLTATGGIPIGSFYEGIHKNNIYLKCLDEKGEPIEDLGNAQVFSSLP 776

Query: 796  ALSEYI--------------------------PLQQVTLGYEMRWEDPLIVRKNRKRMLT 829
            +L+  +                          PL+Q++ G ++RWEDP++ R N +R   
Sbjct: 777  SLNGLLNEETMVKLKAGTLSKEDLVESIMGSTPLKQISKGIDIRWEDPVVPRYNGQRSQR 836

Query: 830  VMADPDLLGEETAATLQQRLQPQIEAIPLPPGYFLEWGGEYESSGDAKASLFKTMPLGYL 889
            V   P    E   A L   +  +IE I LP GY L W GE  +S  +   LF+  PL  +
Sbjct: 837  VQCSPAPGIETEKARL--AIAERIEKIQLPEGYSLVWQGEKIASDQSMKYLFQNFPLAII 894

Query: 890  FMFLITVFLFNSVKESLIVWLTVPLAVIGVTTGLLALNTPFGFMALLGFLSLSGMLLKNG 949
             M  I + LF   ++ +I++  +P+  +GV   +L     F F+A++G L L GML+KNG
Sbjct: 895  LMIAILIMLFKDYRKPIIIFCCIPMIFVGVVAVMLLTGKVFNFVAIVGTLGLIGMLIKNG 954

Query: 950  IVLLDQIEIEMHSGKDPYLAVVDASLSRVRPVCMAAVTTILGMIPLLPDIFFRPMAVTIM 1009
            IVL+D+I +++  G +P  A++D+S SR+RPV MA++TTILGMIPLL D  F  +A  IM
Sbjct: 955  IVLMDEITLQISKGIEPVTALIDSSQSRLRPVMMASLTTILGMIPLLSDAMFGSLAAAIM 1014

Query: 1010 FGLGFATVLTLIVVPVLYRLFHHVK 1034
             GL  +T++TL+ +P+LY LF  ++
Sbjct: 1015 GGLLCSTLITLLFIPILYALFFKIR 1039