Pairwise Alignments

Query, 1037 a.a., AcrB/AcrD/AcrF family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1015 a.a., efflux RND transporter permease subunit from Phocaeicola dorei CL03T12C01

 Score =  636 bits (1640), Expect = 0.0
 Identities = 359/1016 (35%), Positives = 584/1016 (57%), Gaps = 9/1016 (0%)

Query: 22   VAAYFINNRVISWMVSLIFLIGGTAAFFNLGRLEDPAFTIKDAMVVTSYPGATPQQVEEE 81
            +  Y + NR + +    I LIGG  +FF L + ED  F IK A++VT YPGA P +VE+ 
Sbjct: 3    IPKYSLENRKVIYFFLAILLIGGVISFFKLPKKEDAPFVIKTAVLVTQYPGANPHEVEKL 62

Query: 82   VTYPLEKAIQQLTYVDEVNSISSRGLSQITVTMKNNYGPDDLPQIWDELRRKVNDLKGAL 141
            +T P+E+ IQ +T V ++ S S  GLS+I++ ++    PD +P  WDELRRKV +++  L
Sbjct: 63   ITEPIEREIQSMTDVYQIKSESYFGLSKISIELQPTIDPDYMPVKWDELRRKVANIQPKL 122

Query: 142  PPGVNPPLVIDDFGDVYGILLAVTG-EGYSYKELLDYVDYLRRELELIDGVSKVSVSGQQ 200
            P G +   V DDFGDVYGI  A+T  EG+SY +L D+   +R +L  I+GV KV + G+Q
Sbjct: 123  PSGASTITVNDDFGDVYGIYYALTADEGFSYTDLRDWAQRIRTQLTPIEGVQKVMLYGEQ 182

Query: 201  QEQVFIEISMKRISTLGISPQTVFNLLSTQNLVSDAGAIRIGSEYIRIHPTGEFDDVEKL 260
             E + ++IS  ++S LGI P ++  +L  QN+  + G I      +R+   G +  +E +
Sbjct: 183  TEVINVKISTSKLSALGIDPTSIMGILQKQNIQVNTGDIATEIYQLRLRTEGTYTSLEDI 242

Query: 261  -GDLILSERGAQGLIYLRDVAEVKRGYVEVPSNVITFNGKLALNVGVSFAQGVNVVEVGQ 319
               LI+S+ G +  + L D+A V+RGY + PS ++  NGK A+ +GV+     NVV VG+
Sbjct: 243  ENQLIISKDGRE--VRLGDIATVERGYYDPPSTLMRVNGKRAIGIGVASGAKDNVVAVGK 300

Query: 320  RFDRRLAELKYQQPIGIDIAEVYSQPKEVDKSVSGFVVSLGQAVAIVIIVLLFFMGLRSG 379
              D RLAE++   PIGI++A +Y + K  D++ +GF+++L +++ IVI+++   MG R+G
Sbjct: 301  AVDERLAEIEQLLPIGIELASLYPEDKIADEANNGFILNLIESLVIVILIIFVVMGSRAG 360

Query: 380  LLIGLILLLTVLGTFIFMQYFKIDLQRISLGALVIALGMLVDNAIVVVEGILIGTQKGRT 439
            +LIG  LL +V GT + M  + + L R SL A +IA+GMLVDNAIVV +   IG ++G++
Sbjct: 361  MLIGSSLLFSVGGTLLIMLMWGVGLNRTSLAAFIIAMGMLVDNAIVVTDNAQIGIKRGKS 420

Query: 440  RLQAATDIVTQTKWPLLGATVIAVTAFAPIGLSEDATGEYCGTLFTVLLISLMLSWFTAI 499
            R Q+  +   + +W LLGAT IA+ +F P+ L+  +  E    LF VL +SL LSW  A+
Sbjct: 421  RYQSLIEGAIKPQWALLGATFIAICSFLPLYLAPASVAEIVKPLFVVLAVSLGLSWILAL 480

Query: 500  SLTPFFADLFFRGQKAPASGEESDPYQGFIFVVYRRFLEFCMRRAWLTMGVLVLGLAASL 559
              T  F +   +  +A   G   DPY   ++  + +FL   ++R ++T+  + + L  SL
Sbjct: 481  CQTTTFGNFILK--EAVPGGAMKDPYDTKLYHKFEKFLTLLIKRRFVTLTTVFVTLVLSL 538

Query: 560  YGFTKVKQAFFPSSTTPMFMVDVWMPEGTDIRATDAILLELEKWLSAQESVDSVTTTAGK 619
                 + Q+FFP    P F  D+  PEG  I A D  ++++E +L   E V S + T G 
Sbjct: 539  VIMAVMPQSFFPKMNKPYFRADLVFPEGFSIHAVDQDVMKVEGYLKNHEKVKSYSVTLGG 598

Query: 620  GLQRFMLTYSPEKSYAAYGEITTRVTDYQQLAALMARFRAHLDARYPQINYKLKQIELGP 679
               R+ L  S     + Y  +     D +  A +  +F  H+   +P I  +     L P
Sbjct: 599  TPLRYYLASSSFGPKSNYANVMVETKDPEDAAEVEQQFYEHMTQNFPNIITRSALFALSP 658

Query: 680  GGGAKIEARIVGSDPTVLRSIAAQVMDVMYADPGAYNIRHDWRERTKVLEPQFNESQARR 739
               A IE   +G +P  L ++  +   +        +IR +W ++  V +P F++ +  R
Sbjct: 659  VPEAAIEIGFIGENPDTLTALVERAKKIARQCDMVTDIRSNWGDKVPVWKPMFSQQKGLR 718

Query: 740  YGITKADVDEFLAMSFSGKTIGVYRDGTTLMPIVARLPEEERVDIRNIEGMKIWSPALSE 799
             GIT+  V      + +G  +G YR+G   +PI+ +  + E++++ +++ + ++S     
Sbjct: 719  LGITRQQVANSFRTATNGLPLGEYREGDVSLPILLKDEDVEKMNLNDVKSVPVFS-TKGN 777

Query: 800  YIPLQQVTLGYEMRWEDPLIVRKNRKRMLTVMADPDLLGEETAATLQQRLQPQIEAIPLP 859
             + ++QV   + + ++  ++ R NR+R + +  +P   G  T A  +Q L    E + LP
Sbjct: 778  SVKVEQVIDNFALGYDYNVVRRFNRERCMMMQCEPK-RGANTMAAFKQVLTAVQEQMRLP 836

Query: 860  PGYFLEWGGEYESSGDAKASLFKTMPLGYLFMFLITVFLF-NSVKESLIVWLTVPLAVIG 918
             GY +++ GE E+   + A+L K +PL +L ++++ +FLF ++ ++ +++ L +PL  IG
Sbjct: 837  EGYKMKYFGEQETQDVSNAALAKNIPLTFLLIYVVLLFLFPSNYRKPVLIMLMLPLVFIG 896

Query: 919  VTTGLLALNTPFGFMALLGFLSLSGMLLKNGIVLLDQIEIEMHSGKDPYLAVVDASLSRV 978
            V  GLL       F A+LG L L GM +KN IVL+D+I +++  GK    AVV+A+ +R+
Sbjct: 897  VVWGLLLFGKSLDFFAILGLLGLIGMNIKNAIVLVDEIGLQLKDGKGAVPAVVEATKTRI 956

Query: 979  RPVCMAAVTTILGMIPLLPDIFFRPMAVTIMFGLGFATVLTLIVVPVLYRLFHHVK 1034
             PV MA+ TTILGM+PLL D  F  MA TIM GL  +TVLT+ V+PV Y +F  ++
Sbjct: 957  VPVTMASGTTILGMLPLLGDAMFAGMAATIMGGLFVSTVLTIFVLPVTYCIFFKIR 1012