Pairwise Alignments

Query, 1037 a.a., AcrB/AcrD/AcrF family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1015 a.a., Swarming motility protein SwrC from Alteromonas macleodii MIT1002

 Score =  979 bits (2531), Expect = 0.0
 Identities = 492/1011 (48%), Positives = 703/1011 (69%), Gaps = 2/1011 (0%)

Query: 25   YFINNRVISWMVSLIFLIGGTAAFFNLGRLEDPAFTIKDAMVVTSYPGATPQQVEEEVTY 84
            YF   +VISWMV++I  +GG   F  LG+LE P FTI++A+V+T YPGATP+QVEEEVT 
Sbjct: 4    YFFRQKVISWMVAIILGVGGIVTFLGLGQLEFPEFTIRNALVITQYPGATPEQVEEEVTL 63

Query: 85   PLEKAIQQLTYVDEVNSISSRGLSQITVTMKNNYGPDDLPQIWDELRRKVNDLKGALPPG 144
             LEKAIQ++  V  ++S++  GLSQITV +K++    DL Q WD LRRKV D + +LPPG
Sbjct: 64   QLEKAIQRIPNVKRISSVNMVGLSQITVELKSSVQAKDLEQYWDNLRRKVGDAQASLPPG 123

Query: 145  VNPPLVIDDFGDVYGILLAVTGEGYSYKELLDYVDYLRRELELIDGVSKVSVSGQQQEQV 204
             +  +V DDFGDV+G+LL +  E YS K++ D+ D ++RE++L+DGV KVS++G   EQ+
Sbjct: 124  TSTSIVNDDFGDVFGLLLTLKSEDYSLKQMEDFADLMQREIQLVDGVKKVSIAGTVNEQI 183

Query: 205  FIEISMKRISTLGISPQTVFNLLSTQNLVSDAGAIRIGSEYIRIHPTGEFDDVEKLGDLI 264
             + +   ++ TL +S +++  LL+ QN+V +AG+I++  + + I PTGEFD++E LG ++
Sbjct: 184  IVSLDHDKMKTLNVSAESIAGLLTAQNVVGNAGSIKVQGKRLSIQPTGEFDNLEALGQVV 243

Query: 265  LSERGAQGLIYLRDVAEVKRGYVEVPSNVITFNGKLALNVGVSFAQGVNVVEVGQRFDRR 324
            +    A GLI L D+A ++R   + PS +   +G  AL++GVSFA  VNVV+VG+R D +
Sbjct: 244  IGSP-ASGLIRLTDIATIERKLNDTPSILYHSSGTPALSIGVSFASAVNVVDVGKRLDSK 302

Query: 325  LAELKYQQPIGIDIAEVYSQPKEVDKSVSGFVVSLGQAVAIVIIVLLFFMGLRSGLLIGL 384
            +AEL+ + P+G+ +  VY+QP  VD SV+GF+++L +AVAIVI VLL FMG RSG+L+GL
Sbjct: 303  IAELEQRMPLGMTLDTVYNQPTVVDDSVTGFLINLVEAVAIVIFVLLLFMGWRSGVLMGL 362

Query: 385  ILLLTVLGTFIFMQYFKIDLQRISLGALVIALGMLVDNAIVVVEGILIGTQKGRTRLQAA 444
            IL+LT+LGTFI M    I+LQ+ISLGAL+IALGMLVDNAIVV EG+LIG +KG+T+LQAA
Sbjct: 363  ILVLTILGTFILMSVKGIELQKISLGALIIALGMLVDNAIVVTEGMLIGVRKGQTKLQAA 422

Query: 445  TDIVTQTKWPLLGATVIAVTAFAPIGLSEDATGEYCGTLFTVLLISLMLSWFTAISLTPF 504
             D+V+Q   PLLGATVIA+TAFAPIGLS DATGE+ G+LF VL  SL LSW TA+++TPF
Sbjct: 423  KDVVSQNGLPLLGATVIAITAFAPIGLSPDATGEFVGSLFWVLCFSLFLSWITALTITPF 482

Query: 505  FADLFFRGQKAP-ASGEESDPYQGFIFVVYRRFLEFCMRRAWLTMGVLVLGLAASLYGFT 563
            F DL F+ +K   A+ E+ DPY+G IF VY+R L   +   ++T+ ++++ L  S+    
Sbjct: 483  FFDLLFKTEKERGANDEDDDPYKGIIFTVYKRVLTAAINHRYVTIVLVLVALVGSMASGK 542

Query: 564  KVKQAFFPSSTTPMFMVDVWMPEGTDIRATDAILLELEKWLSAQESVDSVTTTAGKGLQR 623
             VK AFFP S+TP+F VD+W+PEG+DI  T+  +  LE  +   E++ +VT+  G G QR
Sbjct: 543  FVKNAFFPDSSTPLFFVDLWLPEGSDILTTEQSIRRLEDNVLGMENIANVTSVIGGGAQR 602

Query: 624  FMLTYSPEKSYAAYGEITTRVTDYQQLAALMARFRAHLDARYPQINYKLKQIELGPGGGA 683
              LTY+PE  YA+YG++       +   A M      +   +P + YK+K +++GP   A
Sbjct: 603  LTLTYAPEDRYASYGQLIVETDTVESRDARMREIIELVREDFPNVQYKVKALQVGPSAKA 662

Query: 684  KIEARIVGSDPTVLRSIAAQVMDVMYADPGAYNIRHDWRERTKVLEPQFNESQARRYGIT 743
             IEARI G +P VLR I++ +  +  A+    ++R  W  +   +EP F E QARR G+T
Sbjct: 663  AIEARIYGPEPEVLREISSDIEAIFQAEKTMDSVRLSWSNKVPFVEPVFLEEQARRIGVT 722

Query: 744  KADVDEFLAMSFSGKTIGVYRDGTTLMPIVARLPEEERVDIRNIEGMKIWSPALSEYIPL 803
            +  V     ++  G+T+G+YR+G+ L+PIV R    +R DI N+  + +WS    +YI +
Sbjct: 723  RDAVHTAFLLNNEGETVGLYREGSDLIPIVMRNDPNQRYDIDNLASLNVWSQEQGKYISM 782

Query: 804  QQVTLGYEMRWEDPLIVRKNRKRMLTVMADPDLLGEETAATLQQRLQPQIEAIPLPPGYF 863
              V    ++  ++P+I R+NR RML V A+P  L  ETAA++Q +++P +E + LP GY 
Sbjct: 783  ADVISNVDVSLDNPIIKRRNRVRMLAVYAEPMPLSGETAASVQAKVRPLVEELQLPDGYH 842

Query: 864  LEWGGEYESSGDAKASLFKTMPLGYLFMFLITVFLFNSVKESLIVWLTVPLAVIGVTTGL 923
            +EWGGEYE+S DA+++LF +MP+G L MF+ITV LF  ++++L +W  +PL  IG+  GL
Sbjct: 843  IEWGGEYETSTDAQSALFASMPIGILGMFIITVLLFGKLRQALAIWGVIPLTTIGIIGGL 902

Query: 924  LALNTPFGFMALLGFLSLSGMLLKNGIVLLDQIEIEMHSGKDPYLAVVDASLSRVRPVCM 983
            + +  PF FMALLG LSL GM+LKNGIVL+++I ++       + AVV AS+SRVRPV M
Sbjct: 903  VLVGAPFTFMALLGSLSLIGMVLKNGIVLMEEINVQAKGNSGAFDAVVAASVSRVRPVSM 962

Query: 984  AAVTTILGMIPLLPDIFFRPMAVTIMFGLGFATVLTLIVVPVLYRLFHHVK 1034
            AA+TTILGMIPL  D FF  MAV I+FGL  ATVLTL+++PVL+  FH +K
Sbjct: 963  AAITTILGMIPLFSDAFFASMAVVIVFGLTVATVLTLLILPVLHCTFHGIK 1013