Pairwise Alignments

Query, 1037 a.a., AcrB/AcrD/AcrF family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1052 a.a., AcrB/AcrD/AcrF family protein from Agrobacterium fabrum C58

 Score =  501 bits (1290), Expect = e-145
 Identities = 304/1017 (29%), Positives = 533/1017 (52%), Gaps = 8/1017 (0%)

Query: 15   ENNENQGVAAYFINNRVISWMVSLIFLIGGTAAFFNLGRLEDPAFTIKDAMVVTSYPGAT 74
            E      ++ + I++  I+  +  + ++ G     N+G+ EDP FT +  +V + +PGA+
Sbjct: 11   EEKHKFNLSRWAISHPSIARFLFGLIIVMGALGVINMGQKEDPDFTFRVMVVQSVWPGAS 70

Query: 75   PQQVEEEVTYPLEKAIQQLTYVDEVNSISSRGLSQITVTMKNNYGPDDLPQIWDELRRKV 134
               ++ +V   +E+ +Q+  ++D V S    G++  T+ +K +    D+   + ++R+KV
Sbjct: 71   IDDMQNQVVNKIERKLQETPHLDWVKSYIRAGVAITTIQIKGDTNGADVADAFYQVRKKV 130

Query: 135  NDLKGALPPGVNPPLVIDDFGDVYGILLAVTGEGYSYKELLDYVDYLRRELELIDGVSKV 194
             D+K  LP G+  P   D+FGD Y  L A++G+GYSY EL  +    R  L  + GV K 
Sbjct: 131  GDIKQDLPSGLLGPYFNDEFGDTYITLHAISGDGYSYPELKKFAIQARDMLIAMPGVEKA 190

Query: 195  SVSGQQQEQVFIEISMKRISTLGISPQTVFNLLSTQNLVSDAGAIRIGSEYIRIHPTGEF 254
             + G Q +++FI++S K ++  G++   + N L  QN V  AG++      +RI   G+ 
Sbjct: 191  VILGDQPQKIFIDVSSKALAERGLTVVDIQNALQGQNDVDPAGSVETADRSVRISVEGDV 250

Query: 255  DDVEKLGDLILSERGAQGLIYLRDVAEVKRGYVEVPSNVITFNGKLALNVGVSFAQGVNV 314
                ++ +L L  +    +I L D+A V+ G  +        NG   + +GV  A+G  V
Sbjct: 251  TTPAEIRELRL--KAGDQVIRLGDIATVRDGLEDPFQRKFRVNGHDTVELGVVMAKGFKV 308

Query: 315  VEVGQRFDRRLAELKYQQPIGIDIAEVYSQPKEVDKSVSGFVVSLGQAVAIVIIVLLFFM 374
             +VG+  +      +   P+G+++ ++ +QP+ V ++V  F  +L +A+ IV+IV L  +
Sbjct: 309  TDVGKGIEETYKRFEDTLPVGVEVTQISNQPEVVTEAVGEFTQALMEALGIVLIVSLISI 368

Query: 375  GLRSGLLIGLILLLTVLGTFIFMQYFKIDLQRISLGALVIALGMLVDNAIVVVEGILIGT 434
            G RSG++I + + L +  T   M Y  I+LQRISLGAL+IALG+LVD+A++VVE +    
Sbjct: 369  GWRSGIVIAVAIPLVLAATLAIMFYMGIELQRISLGALIIALGLLVDDAMIVVEMMERKL 428

Query: 435  QKGRTRLQAATDIVTQTKWPLLGATVIAVTAFAPIGLSEDATGEYCGTLFTVLLISLMLS 494
            ++G  RL AA+   + T +P+L  T+I    F P+G +    GEY  +LF V+ I+L+ S
Sbjct: 429  EEGLNRLDAASFAYSSTAFPMLTGTLITTAGFIPVGFAASTAGEYVRSLFFVVGIALVTS 488

Query: 495  WFTAISLTPFFADLFFRGQKAPASGEESDPYQGFIFVVYRRFLEFCMRRAWLTMGVLVLG 554
            WF A+  TP+   +  + Q+A A G   D Y    +      + + +R   + + + +  
Sbjct: 489  WFVAVYFTPWLGYMILK-QRAHA-GTHHDAYDTRFYRGVGHTVGWAVRHKAIVLLLTLGA 546

Query: 555  LAASLYGFTKVKQAFFPSSTTPMFMVDVWMPEGTDIRATDAILLELEKWLSAQESVDSVT 614
               SL+ F  + Q+FFP S+ P  +VD+W+PEGT I+  +     LE  +        V 
Sbjct: 547  FVGSLWSFQFIPQSFFPQSSRPEILVDMWLPEGTAIKEVERQAKALEAKIMDDPDKKFVA 606

Query: 615  TTAGKGLQRFMLTYSPEKSYAAYGEITTRVTDYQQLAALMARFRAHLDARYPQINYKLKQ 674
            T  G+G  RF L    +     Y ++       ++   ++ + R  L   +P +  K+ +
Sbjct: 607  TFIGEGAPRFFLPLDQQLRNPNYAQLLVMSNGLEERERMIVKLRKILAEDFPTVRGKVDR 666

Query: 675  IELGPGGGAKIEARIVGSDPTVLRSIAAQVMDVMYADPGAYNIRHDWRERTKVLEPQFNE 734
            + LGP  G  ++ R+VG D   +RSIA QV       P    +  DW E    ++   ++
Sbjct: 667  LFLGPPVGWAVQMRVVGPDRAEVRSIADQVKQRFEQQPNFGAVHDDWMEPVPAMKLVIDQ 726

Query: 735  SQARRYGITKADVDEFLAMSFSGKTIGVYRDGTTLMPIVARLPEEERVDIRNIEGMKIWS 794
             +AR  G++   V + L  + +G  I  +RDG   + IV R P+  R  +  +  + I  
Sbjct: 727  DRARALGVSSQRVRQILQAATNGAAISDFRDGEETVSIVVREPDATRSLLSAVNSVYI-P 785

Query: 795  PALSEYIPLQQVTLGYEMRWEDPLIVRKNRKRMLTVMAD-PDLLGEETAATLQQRLQPQI 853
              +  ++P  Q+     +  E  +  R++R   +TV A  PD + E T  T+        
Sbjct: 786  TDIGGFVPASQIARVVPL-LEQGIEWRRDRLPTITVKATLPDGV-EPTQVTMNLYNSMAD 843

Query: 854  EAIPLPPGYFLEWGGEYESSGDAKASLFKTMPLGYLFMFLITVFLFNSVKESLIVWLTVP 913
                LP GY +E  G  E + +++ S+    P+  L + ++ +       ++++V  T P
Sbjct: 844  LRAKLPAGYKVEIQGGAEDAAESQQSIAAKAPIMLLVILVLLMIQLQHFGKAMLVLATGP 903

Query: 914  LAVIGVTTGLLALNTPFGFMALLGFLSLSGMLLKNGIVLLDQIEIEMHSGKDPYLAVVDA 973
            L +IG    LL    PFGF+A+LG ++L G++++N I+L+DQI+ ++ +G     A+V A
Sbjct: 904  LGIIGAAMALLITGAPFGFVAILGVIALLGIIMRNSIILVDQIDQDIAAGHPRAEAIVGA 963

Query: 974  SLSRVRPVCMAAVTTILGMIPLLPDIFFRPMAVTIMFGLGFATVLTLIVVPVLYRLF 1030
            ++ R RP+ + A+T +L +IP+   +F+ PMA  +M G+  ATVLT++V+P  Y LF
Sbjct: 964  AVRRFRPIMLTALTAVLALIPISRGLFWGPMAYAMMGGILVATVLTILVLPAAYALF 1020