Pairwise Alignments

Query, 1037 a.a., AcrB/AcrD/AcrF family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1048 a.a., AcrB/AcrD/AcrF family protein from Agrobacterium fabrum C58

 Score =  317 bits (811), Expect = 4e-90
 Identities = 268/1029 (26%), Positives = 467/1029 (45%), Gaps = 52/1029 (5%)

Query: 27   INNRVISWMVSLIFLIGGTAAFFNLGRLEDPAFTIKDAMVVTSYPGATPQQVEEEVTYPL 86
            +N+ V + M+ +  L+ G  +   LG  + P   +   +VVTSYPGATP+ VE EVT P+
Sbjct: 8    VNHPVFATMMMVALLVMGAFSLQRLGLDQYPNVDVPVVVVVTSYPGATPETVEMEVTRPV 67

Query: 87   EKAIQQLTYVDEVNSISSRGLSQITVTMKNNYGPDDLPQIWDELRRKVNDLKGALPPGVN 146
            E A+  +  +DEV S S  G S +    K         Q   E+R K+  ++   P    
Sbjct: 68   EDALNAIGGLDEVTSTSYEGRSVVVAKFKLEVQSSAAAQ---EVRDKIAAIEANFPEDTK 124

Query: 147  PPLVIDDFGDVYGIL-LAVTGEGYSYKELLDYVDY-LRRELELIDGVSKVSVSGQQQEQV 204
             P++         IL LA++        L    +  + R+L  + G+ + ++ G ++ Q+
Sbjct: 125  KPVISRFDPAAEPILSLAISSTSLDVPALATLAEQKVVRQLTTVAGIGQATLVGGRKRQI 184

Query: 205  FIEISMKRISTLGISPQTVFNLLSTQNLVSDAGAIRIGSEYIRIHPTGEFDDVEKLGDLI 264
             + I   R+  LGI    V   L   N  S AG++        I      ++ E L D++
Sbjct: 185  DVTIDETRMRALGIGVNEVVTALRAGNSNSPAGSVVDPVSERTIQIQSRIEEPEALLDMV 244

Query: 265  LSERGAQGLIYLRDVAEVKRGYVEVPSNVITFNGKLALNVGVSFAQGVNVVEVGQRFDRR 324
            ++ RG   ++ LRDVA +  G  +  +  I +NG+ AL + +   Q  N V+V     +R
Sbjct: 245  VARRGGVAIL-LRDVATLSEGAADAENRAI-YNGQTALAIDIVKVQDANTVQVVSDVRKR 302

Query: 325  LAELKYQ-QPIGIDIAEVYSQPKEVDKSVSGFVVSLGQAVAIVI-IVLLFFMGLRSGLLI 382
            L  L  +  P  I +  V      + +SV+    +L +  A+ + IV LF    RS ++ 
Sbjct: 303  LDALNAELSPQNIQLRIVTDSSIPIQESVTQVQTTLIEGAALAVAIVFLFLNSWRSTVIT 362

Query: 383  GLILLLTVLGTFIFMQYFKIDLQRISLGALVIALGMLVDNAIVVVEGILIGTQKGRTRLQ 442
            GL L + ++GT   + +    L  +SL AL +++G+LVD+AIVV E I      G++ L+
Sbjct: 363  GLTLPIAIIGTLTVVDFLGFTLNTLSLLALTLSIGILVDDAIVVRENITRHLHMGKSHLR 422

Query: 443  AATDIVTQTKWPLLGATVIAVTAFAPIGLSEDATGEYCGTLFTVLLISLMLSWFTAISLT 502
            AA D   +    ++  T   V  F P+   +   G +       +  ++++S F A +L 
Sbjct: 423  AALDGTGEIGLAVIATTATIVAVFLPVAFMDGIVGRFFYQFGVTVSAAVLISLFVAFTLD 482

Query: 503  PFFADLFFR------GQKAPASGEESDPYQGFIFVV--YRRFLEFCMRRAWLTMGVLVLG 554
            P  + +++        ++ P     +    GF ++   YR  +++ +R   +T+ V    
Sbjct: 483  PMLSSVWYDPDAQADAKRGPIGRLIARFDHGFEWMAGQYRHAIDWTLRHRLVTLLVTAGI 542

Query: 555  LAASLYGFTKVKQAFFPSSTTPMFMVDVWMPEGTDIRATDAILLELEKWLSAQESVDSVT 614
               SL+    V   F P +    F +++  P G+ +  T A L +++K L     V+ + 
Sbjct: 543  FIGSLFMVPLVGTEFVPDADEGRFQINLTAPVGSSLDYTTAKLQQVKKALREFPEVEMLY 602

Query: 615  TTAGKGLQRFMLTYSPEKSYAAYGEITTRVTDYQQLAALMARFRAHLDARYPQINYKLKQ 674
            +T   G           ++    G +     +   L+ L    R  L A  P I   + Q
Sbjct: 603  STINTGGAA-----GKHRAAILVGLVPLSAREQTPLS-LAEPVRKRLSA-IPGIEINILQ 655

Query: 675  IELGPGGGAKIEARIVGSDPTVLRSIAAQVMDVMYADPGAYNIRHDWRERTKVLEPQFNE 734
              LG GG + ++  I+G D  VL  IA  +++ M   PG   +    ++ T +L  +   
Sbjct: 656  NGLG-GGESPVQLSILGDDRAVLEKIANGLVEDMKKIPGLVEVTSSTKDVTSILSVRLKP 714

Query: 735  SQARRYGITKADVDEFLAMSFSGKTIGVYRDGT-TLMPIVARLPEEERVDIRNIEGMKIW 793
            + A   GI +AD+   L+    G+ +  + D       IV RLP E R D   +  + I 
Sbjct: 715  AAASDLGIARADLAAALSALIGGEDVSKWTDAHGNSYDIVVRLPVERRSDAARLGELMIT 774

Query: 794  SPA-----------LSEYIPLQQVTLGYEMRWEDPLIVRKNRKRMLTVMADPDLLGEETA 842
            +             L +   +  V    E+R       R + +R + V A+   +   T 
Sbjct: 775  TGRTGANGAPLMVRLDQVADIGTVAAPAEIR-------RFDNRREILVSAN---ITGRTL 824

Query: 843  ATLQQRLQPQIEAIPLPPGYFLEWGGEYESSGDAKASLFKTMPLGYLFMFLITVFLFNSV 902
              + + LQ    +  LP GY + +GGE E+  +    +   + +  +F++++    F S 
Sbjct: 825  GDVTETLQGLTASRDLPAGYRIRFGGEAETMQETVGHMGTALSMAIIFIYIVLASQFGSF 884

Query: 903  KESLIVWLTVPLAVIGVTTGLLALNTPFGFMALLGFLSLSGMLLKNGIVLLDQIEIEMHS 962
             + L + +++PL++IGV  GL+   +     +L+GF+ L G++ KNGI+L+D    E   
Sbjct: 885  LQPLAIMVSLPLSLIGVLLGLMVAGSTINMFSLIGFIMLMGLVTKNGILLVDFANRERRR 944

Query: 963  GKDPYLAVVDASLSRVRPVCMAAVTTILGMIPLLPDI-----FFRPMAVTIMFGLGFATV 1017
            G     A+ +A + R RP+ M  +  I GMIPL   +        PMA  ++ GL  +T+
Sbjct: 945  GLTLNEALANAGVIRFRPIIMTTLAMIFGMIPLGLAVGGGGAQRAPMAHAVVGGLISSTL 1004

Query: 1018 LTLIVVPVL 1026
            LTLIVVPV+
Sbjct: 1005 LTLIVVPVI 1013