Pairwise Alignments

Query, 1037 a.a., AcrB/AcrD/AcrF family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1036 a.a., cation efflux system protein from Agrobacterium fabrum C58

 Score =  564 bits (1453), Expect = e-164
 Identities = 324/1019 (31%), Positives = 554/1019 (54%), Gaps = 10/1019 (0%)

Query: 22   VAAYFINNRVISWMVSLIFLIGGTAAFFNLGRLEDPAFTIKDAMVVTSYPGATPQQVEEE 81
            ++A  +  R ++    ++    G  AF  LGR EDP+FTIK   V + +PGAT +++++ 
Sbjct: 5    LSALAVRERAVTLFFIVLLAAAGVYAFIKLGRAEDPSFTIKTLTVTSVWPGATAREMQDL 64

Query: 82   VTYPLEKAIQQLTYVDEVNSISSRGLSQITVTMKNNYGPDDLPQIWDELRRKVNDLKGAL 141
            V  PLEK IQ+LT+ D V + +  G + +TVT++++     +   + + R+K+ D    L
Sbjct: 65   VAEPLEKRIQELTWYDRVETTTRPGYAFLTVTLRDDTPASAVEGEFYQARKKLGDEARNL 124

Query: 142  PPGVNPPLVIDDFGDVYGILLAVTGEGYSYKELLDYVDYLRRELELIDGVSKVSVSGQQQ 201
            PPGV  P V D++ DV   L A+  +G + +EL+   + +R+++  + GV K+++ G+Q 
Sbjct: 125  PPGVIGPFVNDEYSDVSFALYALKAKGMAMRELVRQAETIRQDMLHVPGVKKINILGEQP 184

Query: 202  EQVFIEISMKRISTLGISPQTVFNLLSTQNLVSDAGAIRIGSEYIRIHPTGEFDDVEKLG 261
            EQ+F+E S  +++TLGIS Q + + L  +N V+ AG+I      + I   G +D VE + 
Sbjct: 185  EQIFVEFSYSKLATLGISAQDIASALQRRNTVTPAGSIDTQGPQVFIRFDGAYDSVESIA 244

Query: 262  DLILSERGAQGLIYLRDVAEVKRGYVEVPSNVITFNGKLALNVGVSFAQGVNVVEVGQRF 321
            D  +   G   ++ L D AEV+RGY +  + +I  +G+ A+ +GV   QG N +E+G+  
Sbjct: 245  DTPIVAAGR--VLKLSDFAEVRRGYQDPATYLIRHDGEPAIMLGVVMQQGWNGLELGKAL 302

Query: 322  DRRLAELKYQQPIGIDIAEVYSQPKEVDKSVSGFVVSLGQAVAIVIIVLLFFMGLRSGLL 381
            + R + +    P+G+ +A+V  Q   +D++V  F++    A+ +V+ V L  +G R G++
Sbjct: 303  EERSSTIAQTLPLGVTLAKVSDQAVNIDEAVGEFMLKFAMALGVVLFVSLIALGWRVGIV 362

Query: 382  IGLILLLTVLGTFIFMQYFKIDLQRISLGALVIALGMLVDNAIVVVEGILIGTQKGRTRL 441
            + L + LT+   F+ M        RI+LGAL++ALG+LVD+AI+ +E +++  ++G  R+
Sbjct: 363  VALAVPLTLAVVFLIMLETGRFFDRITLGALILALGLLVDDAIIAIEVMVVKMEEGMDRI 422

Query: 442  QAATDIVTQTKWPLLGATVIAVTAFAPIGLSEDATGEYCGTLFTVLLISLMLSWFTAISL 501
            +AA    + T  P+L  T++ +    P+G ++ + GEY G +F V+  +L++SW  A++ 
Sbjct: 423  KAAAYAWSHTAAPMLSGTLVTIIGLMPVGFAKSSAGEYAGNIFWVVGFALIVSWIVAVTF 482

Query: 502  TPFFADLFFRGQKAPASGEESDPYQGFIFVVYRRFLEFCMRRAWLTMGVLVLGLAASLYG 561
            TP+         K P  G     Y    +   R  +EF +R  +LT G++ + +A S+ G
Sbjct: 483  TPYLGVKMLPEIK-PVEGGHHAIYNTPNYRRLRSLIEFAVRHKFLTCGLVGVIMAVSVVG 541

Query: 562  FTKVKQAFFPSSTTPMFMVDVWMPEGTDIRATDAILLELEKWLSAQESVDSVTTTAGKGL 621
               VKQ FFP+S  P  +V+V MPEG  I  T A + +LE WL  Q      T+  G+G 
Sbjct: 542  MGSVKQQFFPTSDRPEVLVEVRMPEGASIETTTATVKKLEGWLKEQPETKIATSYIGQGA 601

Query: 622  QRFMLTYSPEKSYAAYGEITTRVTDYQQLAALMARFR-AHLDARYPQINYKLKQIELGPG 680
             RF    +PE    A+ +I     D      L  R R A      P+ + ++ Q+  GP 
Sbjct: 602  PRFFFAMAPELPNPAFAKIVALTPDAHAREELKHRLREAIASGLAPEASVRVTQLVFGPY 661

Query: 681  GGAKIEARIVGSDPTVLRSIAAQVMDVMYADPGAYNIRHDWRERTKVLEPQFNESQARRY 740
                +E RI G DP  L  I+ + + +M + P       DW  RT VL    ++ +    
Sbjct: 662  TPFPVEFRITGPDPDQLYKISDEALSIMRSVPDVRQPNRDWGNRTPVLRFIPDQDRLNLI 721

Query: 741  GITKADVDEFLAMSFSGKTIGVYRDGTTLMPIVARLPEEERVDIRNIEGMKIWSPALSEY 800
            G++ A+  + + +  SG  I   R+    +P++AR   E R+D   +    + S +    
Sbjct: 722  GLSPAEAAQQMQLLLSGVPITQVRENIRNVPVIARSAGENRLDPSRLSDFSLMSRS-GRP 780

Query: 801  IPLQQVTLGYEMRWEDPLIVRKNRKRMLTVMADPDLLGE--ETAATLQQRLQPQIEAIPL 858
            +PL Q+    E+R+E+P++ R++R  ++T+ +D +   +  E +  + + LQP I +  L
Sbjct: 781  VPLDQIGHS-EIRFEEPIMKRRDRTPVITIRSDINEATQPPEVSQQVFKALQPLIAS--L 837

Query: 859  PPGYFLEWGGEYESSGDAKASLFKTMPLGYLFMFLITVFLFNSVKESLIVWLTVPLAVIG 918
            P GY +E GG  E S  A  +L K  PL    M ++ +    S+    +V LT PL + G
Sbjct: 838  PAGYRIEMGGNIEESLKANTALVKIFPLMVAAMLIVIILQVRSLSTMTMVMLTAPLGLAG 897

Query: 919  VTTGLLALNTPFGFMALLGFLSLSGMLLKNGIVLLDQIEIEMHSGKDPYLAVVDASLSRV 978
                LL  N PFGF A+LG + L+G+L++N ++L +QI+    +G D Y AV++A++ R 
Sbjct: 898  AVPMLLIFNQPFGFNAILGLIGLAGILMRNTLILTEQIKENQAAGLDDYHAVIEATVQRT 957

Query: 979  RPVCMAAVTTILGMIPLLPDIFFRPMAVTIMFGLGFATVLTLIVVPVLYRLFHHVKVPQ 1037
            RPV + A+  +L  IPL   +F+  MA T++ G    T++ L+ +P LY  +  +K P+
Sbjct: 958  RPVILTALAAVLAFIPLTHSVFWGSMAYTLIGGTAVGTIMILLFLPALYAAWFRIKPPR 1016