Pairwise Alignments

Query, 1037 a.a., AcrB/AcrD/AcrF family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1023 a.a., AcrB/AcrD/AcrF family protein from Agrobacterium fabrum C58

 Score =  566 bits (1459), Expect = e-165
 Identities = 326/1007 (32%), Positives = 558/1007 (55%), Gaps = 20/1007 (1%)

Query: 27   INNRVISWMVSLIFLIGGTAAFFNLGRLEDPAFTIKDAMVVTSYPGATPQQVEEEVTYPL 86
            + +R + W   L+F++ G  ++ NLGR EDP FTIK  ++   +PGA+ ++V  +VT  +
Sbjct: 11   LEHRSLVWYFMLVFVLAGVFSYLNLGREEDPNFTIKTMVISAQWPGASAEEVARQVTDRI 70

Query: 87   EKAIQQLTYVDEVNSISSRGLSQITVTMKNNYGPDDLPQIWDELRRKVNDLKGALPPGVN 146
            EK +++L  +D + S +  G + I V +       ++   W  +R  + D+KG  P GV 
Sbjct: 71   EKKLEELDNLDHLRSQTVAGRTTIFVELVPETKARNVEPTWVRVRNMIGDIKGEFPSGVV 130

Query: 147  PPLVIDDFGDVYGILLAVTGEGYSYKELLDYVDYLRRELELIDGVSKVSVSGQQQEQVFI 206
             P   D FGDVYG + A T +G S ++L D V+  R ++  +D + KV V G Q E +++
Sbjct: 131  GPFFNDRFGDVYGNIYAFTSDGLSQRQLRDLVEDARAKVLTVDDIGKVDVIGAQDEAIYL 190

Query: 207  EISMKRISTLGISPQTVFNLLSTQNLVSDAGAIRIGSEYIRIHPTGEFDDVEKLGDLILS 266
            E S ++I+ LGI  Q++   L +QN V+ +G +  G E + +  +G+F   + L  + L 
Sbjct: 191  EFSTRQIAALGIDQQSIIKTLQSQNAVTQSGFVNAGPERVALRVSGQFTSEDSLRSINL- 249

Query: 267  ERGAQGLIYLRDVAEVKRGYVEVPSNVITFNGKLALNVGVSFAQGVNVVEVGQRFDRRLA 326
             R       L +VA ++RGYV+ PS++  FNG+ A+ + +    G N++  G+  D ++ 
Sbjct: 250  -RVNNRFFPLTEVATIRRGYVDPPSSLFRFNGQPAIGLAIGMKTGANLLHFGEALDAQMK 308

Query: 327  ELKYQQPIGIDIAEVYSQPKEVDKSVSGFVVSLGQAVAIVIIVLLFFMGLRSGLLIGLIL 386
             +    P+G+D+  V  QP  VD++VSGF  +L +A+AIV+++    +GLR+G+++ + +
Sbjct: 309  RVVADLPVGVDVHRVSDQPAVVDEAVSGFTSALFEAIAIVLVISFISLGLRAGMVVAVSI 368

Query: 387  LLTVLGTFIFMQYFKIDLQRISLGALVIALGMLVDNAIVVVEGILIGTQKGRTRLQAATD 446
             L +  TF++M+Y  I LQRISLGAL+IALG+LVD+A++ VE ++   + G    +AAT 
Sbjct: 369  PLVLAITFVYMEYTGISLQRISLGALIIALGLLVDDAMIAVEMMVARLEVGDDLRKAATY 428

Query: 447  IVTQTKWPLLGATVIAVTAFAPIGLSEDATGEYCGTLFTVLLISLMLSWFTAISLTPFFA 506
            + T T +P+L  T++ V  F P+GL+  A GE+  TLF V+ +SL++SW  A+  TP   
Sbjct: 429  VYTSTAFPMLTGTLVTVAGFIPVGLNNSAAGEFTFTLFVVIAVSLIVSWIVAVLFTPLLG 488

Query: 507  DLFFRGQKAPASGEESDPYQGFIFVVYRRFLEFCMRRAWLTMGVLVLGLAASLYGFTKVK 566
                         ++     GF +++ R      +R  W+T+   V   A S+ G + V+
Sbjct: 489  VTILPKTMKSHHEKKGRFASGFSWLLGR-----ALRWRWVTIVATVALFALSIGGMSLVQ 543

Query: 567  QAFFPSSTTPMFMVDVWMPEGTDIRATDAILLELEKWLSAQES-VDSVTTTAGKGLQRFM 625
            Q FFPSS     +VD  +P+ + I  T+  + + E+ + A+ + +D  TT  G+G  RF+
Sbjct: 544  QQFFPSSDRVELIVDWNLPQNSSIAETNRQMAQFEQEMLAKNTDIDHWTTYVGEGAPRFI 603

Query: 626  LTYSPEKSYAAYGE--ITTRVTDYQQLAALMARFRAHLDARYPQINYKLKQIELGPGGGA 683
            L++  +     +G+  I T+  D +    + A  + +LD  +   +  +K +++GP  G 
Sbjct: 604  LSFDVQTPDVTFGQTVIVTKGLDVRD--KVRAELQDYLDRTFIGTDAFVKLLDIGPPVGK 661

Query: 684  KIEARIVGSDPTVLRSIAAQVMDVMYADPGAYNIRHDWRERTKVLEPQFNESQARRYGIT 743
             ++ R+ G D   +R +  Q+  ++       N+  DW E T+V++    + +AR+ G++
Sbjct: 662  PVQYRLSGPDIQKVRELGQQLSGIVGEHRLLSNLVMDWNEPTRVVKVDVLQDKARQLGVS 721

Query: 744  KADVDEFLAMSFSGKTIGVYRDGTTLMPIVARLPEEERVDIRNIEGMKIWSPALS-EYIP 802
              D+   +     G T+   RD   L+ +VAR    ER  I  ++ +++  PA + + +P
Sbjct: 722  SEDIANAMNSIVEGSTVTQVRDDIYLVNVVARAQLAERGSIETLQNLQL--PATNGKAVP 779

Query: 803  LQQVTLGYEMRWEDPLIVRKNRKRMLTVMADPDLLGEETAATLQQRLQPQIEAIP--LPP 860
            L  +   +    E P I R++R   +TV A   ++G    AT+ ++L+P++EA    LP 
Sbjct: 780  LSAIA-NFRYELEQPTIWRRDRIPTVTVKA--AIIGPTQPATIVEQLKPKLEAFEKMLPV 836

Query: 861  GYFLEWGGEYESSGDAKASLFKTMPLGYLFMFLITVFLFNSVKESLIVWLTVPLAVIGVT 920
            GY LE GG  ESS D++A +   +PL    M  I +    S     +V+   P A+IGV 
Sbjct: 837  GYKLETGGSVESSADSQAPIVAVVPLMLFAMATILMVQLQSFSRLFLVFAVAPTALIGVV 896

Query: 921  TGLLALNTPFGFMALLGFLSLSGMLLKNGIVLLDQIEIEMHSGKDPYLAVVDASLSRVRP 980
              LL  N P GF+A+LG L+L G+L++N ++L+ QIE     G   + AV++A+  R+RP
Sbjct: 897  VALLFSNAPMGFVAILGVLALIGILIRNSVILVVQIEHLRSEGVSAWRAVIEATEHRMRP 956

Query: 981  VCMAAVTTILGMIPLLPDIFFRPMAVTIMFGLGFATVLTLIVVPVLY 1027
            + + A    L +IP+  +IF+ PMA  +M G+   T LTL+ +P LY
Sbjct: 957  IMLTAAAATLALIPISREIFWGPMAYAMMGGIVVGTALTLLFLPALY 1003