Pairwise Alignments

Query, 1037 a.a., AcrB/AcrD/AcrF family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1034 a.a., Multidrug resistance protein MdtC from Acinetobacter radioresistens SK82

 Score =  272 bits (696), Expect = 8e-77
 Identities = 236/1035 (22%), Positives = 448/1035 (43%), Gaps = 55/1035 (5%)

Query: 31   VISWMVSLIFLIGGTAAFFNLGRLEDPAFTIKDAMVVTSYPGATPQQVEEEVTYPLEKAI 90
            V + M+ L  ++ G A++  +G  E P       +V TSYPGA+P+ VE E+T  +E  I
Sbjct: 12   VFTIMMMLCLMVLGLASWQRMGVEEYPDVDFPFVVVYTSYPGASPETVESEITKKMEDQI 71

Query: 91   QQLTYVDEVNSISSRGLSQITVTMKNNYGPDDLPQIWDELRRKVNDLKGALPPGVNPPLV 150
              ++ + ++ S SS GLS I      +       Q   ++R K+  +       +  P V
Sbjct: 72   NTISGLKKLTSTSSEGLSTIVAEFDLDISSSVAAQ---DVRDKIASVTAQFRDEIEDP-V 127

Query: 151  IDDFGDVYGILLAVTGEG--YSYKELLDYVDY-LRRELELIDGVSKVSVSGQQQEQVFIE 207
            ++ +      ++++  E    S K+L  Y+D  +  +L  ++GV  V++ G  Q Q+ I 
Sbjct: 128  VERYDPTSSAIMSLVFESNNMSLKDLSSYLDQRILPQLRTVEGVGNVNLLGDAQRQIRIA 187

Query: 208  ISMKRISTLGISPQTVFNLLSTQNLVSDAGAIRIGSEYIRIHPTGEFDDVEKLGDLILSE 267
            +  K++ + G+    V N L  +N+    GA++     + +    +  +  + G+LI++ 
Sbjct: 188  VDPKKLRSFGVGIDQVINTLKNENVQIPGGALQQPDSELVVEIQAKVLNPYQFGELIIAN 247

Query: 268  RGAQGL-IYLRDVAEVKRGYVEVPSNVITFNGKLALNVGVSFAQGVNVVEVGQRFDRRLA 326
            +  QG  +YL+ VA +     E+ +     NGK A+ + +  +   N+V+V +   + + 
Sbjct: 248  K--QGTPVYLKQVATITDSQAEMETAAY-LNGKSAVAIDILRSADANIVDVVKNAYQVID 304

Query: 327  ELKYQQPIGIDIAEVYSQPKEVDKSVSGFVVSLGQAVAIVIIVLLFFMG-LRSGLLIGLI 385
             ++ Q P G  +  V    + +  ++     ++ +   + II++L F+G  RS ++ GL 
Sbjct: 305  RIEQQLPAGTTLKVVVDNSESIQSTIKDVARTIVEGAVLAIIIVLLFLGSFRSTVITGLT 364

Query: 386  LLLTVLGTFIFMQYFKIDLQRISLGALVIALGMLVDNAIVVVEGILIGTQKGRTRLQAAT 445
            L + +LGT  F+  F   +  ++L AL +++G+L+D+AIVV E I+  +  G+  + AA 
Sbjct: 365  LPIALLGTLTFIWAFGFTINMMTLLALSLSIGLLIDDAIVVRENIVRHSDMGKDHVTAAL 424

Query: 446  DIVTQTKWPLLGATVIAVTAFAPIGLSEDATGEYCGTLFTVLLISLMLSWFTAISLTPFF 505
            D   +    +L  T+  V  F P+       G +       +  ++++S F + +L P  
Sbjct: 425  DGTKEIGLAVLATTLTIVAVFLPVAFMGGIIGRFFYQFGVTVSTAVLISMFVSFTLDPML 484

Query: 506  ADLFFRGQKAPASGEESDPYQGF-------IFVVYRRFLEFCMRRAWLTMGVLVLGLAAS 558
            +  +   +  P        +  +       +  VY + L   +R   LT+ + VL L  +
Sbjct: 485  SAHWAERKDRPKKQNTLTRFFAWTSKKLDDLTAVYEKLLRLALRFRLLTVLIAVLSLFGA 544

Query: 559  LYGFTKVKQAFFPSSTTPMFMVDVWMPEGTDIRATDAILLELEKWLSAQESVDSV----- 613
                  +   F P+       V    P    ++ T A L ++E  +     V +      
Sbjct: 545  FALSKLIGTEFVPTPDKGSIRVKFETPVDASLQYTQAKLQQVENIIRQHPEVQTTYGVIN 604

Query: 614  -TTTAGKGLQRFMLTYSPE-KSYAAYGEITTRVTD-YQQLAALMARFRAHLDARYPQINY 670
              T  GK      +T +P  +      ++   + +  QQ+  +     A  D        
Sbjct: 605  GMTDRGKNHGSIRVTVTPRHEREQTLNDLNNDLRNRLQQVGGITITSVASAD-------- 656

Query: 671  KLKQIELGPGGGAKIEARIVGSDPTVLRSIAAQVMDVMYADPGAYNIRHDWRERTKVLEP 730
                 E+  GG   I+  I G D   L+ I+ + M  M    G  ++    +E    L  
Sbjct: 657  -----EVVSGGRKPIQISIKGPDLDELQRISDRFMAEMKKINGVVDLETSLKEPKPTLSV 711

Query: 731  QFNESQARRYGITKADVDEFLAMSFSGKTIGVYRDGT-TLMPIVARLPEEERVDIRNIEG 789
              N   A   G++   +   +    +G  +  + D       +  RL E  R    +I+ 
Sbjct: 712  SINRVLASDLGLSVNQIANVVRPLIAGDNVTTWEDERGENYDVNLRLSENARTLPSDIQN 771

Query: 790  MKIWSPALSE-----YIPLQQVTLGYEMRWEDPLIVRKNRKRMLTVMADPDLLGEETAAT 844
            M I S  L        +PL  V    E      +     R+    V+ + +  G   A  
Sbjct: 772  MYITSEKLDNNNQNILVPLATVASFKETSGASQI---NRRELSREVLIEANTSGRP-AGD 827

Query: 845  LQQRLQPQIEAIPLPPGYFLEWGGEYESSGDAKASLFKTMPLGYLFMFLITVFLFNSVKE 904
            +   +        LPPGY  +  G      ++       + L  +F++++    FNS   
Sbjct: 828  IGGDIDAMQAQFKLPPGYSFDTEGANADMAESLGYAITAITLSIVFIYIVLGSQFNSFIH 887

Query: 905  SLIVWLTVPLAVIGVTTGLLALNTPFGFMALLGFLSLSGMLLKNGIVLLDQIEIEMHSGK 964
               +  ++PL++IGV   L   N+     +++G + L G++ KN I+L+D I+  + SG 
Sbjct: 888  PAAIMASLPLSLIGVFLALYLFNSTMNLFSIIGIIMLMGLVTKNAILLIDFIKKGIESGM 947

Query: 965  DPYLAVVDASLSRVRPVCMAAVTTILGMIPLLPDI-----FFRPMAVTIMFGLGFATVLT 1019
            D Y A+V A  +R+RP+ M     ++GM+PL   +        PMA  ++ G+  +T+LT
Sbjct: 948  DRYDAIVAAGTTRLRPILMTTSAMVMGMVPLALGLGESGEQSSPMAHAVIGGVITSTLLT 1007

Query: 1020 LIVVPVLYRLFHHVK 1034
            L+VVP+++     +K
Sbjct: 1008 LVVVPIIFTYLDDLK 1022