Pairwise Alignments

Query, 448 a.a., sodium-dependent transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 456 a.a., Sodium:neurotransmitter symporter family protein from Bacteroides ovatus ATCC 8483

 Score =  258 bits (658), Expect = 4e-73
 Identities = 167/466 (35%), Positives = 261/466 (56%), Gaps = 43/466 (9%)

Query: 5   MASGSRGQFTSRFGFIMAAAGSAVGLGNVWGFPTQAASNGGAVFLLVYLCMVFLLAYPML 64
           MA   R  F S+ G I+A+AGSAVGLGN+W FP +  ++GGA F+L+YL  + LL  P++
Sbjct: 1   MAKNDRANFGSKLGVILASAGSAVGLGNIWRFPYETGNHGGAAFILIYLGCILLLGLPIM 60

Query: 65  VAELTIGRYGQSNPIRAFRSVWPQGKWGAILLGVIGMVVVSLILSFYAIVAGWLVGSLFG 124
           +AE  IGR  ++N  RA++ + P   W  +  G +G++   LILS+YA+VAGW +  +F 
Sbjct: 61  IAEFLIGRRSRANTARAYQKLAPGTHWRWV--GRMGVLAGFLILSYYAVVAGWTLEYIFE 118

Query: 125 SGLTLIGADSASQWLTSF-----STERNLILMVSFMVLTMFVVRNGVANGIEKWSTRLMP 179
           +        ++ ++++SF     S  R ++ +V+F+++T F++  GV  GIEK S  +MP
Sbjct: 119 AATNGFAGKTSGEFISSFQQFSSSPWRPVVWLVAFLLITHFIIVKGVEKGIEKSSKIMMP 178

Query: 180 LLFVLFGLLTVYIFTQEGALDGLKMYLVPDLSHFTPDVVVSAMGQAFFSLSLGVCVMTTY 239
            LF++  +L V   T  GA  G++  L PD S    +V +SAMGQAFFSLSLG+  + TY
Sbjct: 179 TLFIIILILVVCSVTLPGAGAGIEFLLKPDFSKVDGNVFLSAMGQAFFSLSLGMGCLCTY 238

Query: 240 GSYLNKEANLPKTAAQVALIDTGVAFIAGLMVLPAMFVAKHNGVEIFSSSGELLNSDTLV 299
            SY +KE NL KTA  V +IDT VA +AG ++ PA F      V I   SG      +L+
Sbjct: 239 ASYFSKETNLTKTAFSVGIIDTFVAILAGFIIFPAAF-----SVGIQPDSG-----PSLI 288

Query: 300 FTVLPAMFDT----MGAVGAVIGIIFFLLMIIAALTSSISMLEVPVACAVEELQQKRSSA 355
           F  LP +F      +  +  +  ++F+ L+ +AALTS+IS+ EV  A   EE    R  A
Sbjct: 289 FITLPNVFQQAFSGVPILAYIFSVMFYALLAMAALTSTISLHEVVTAYLHEEFNLSRGKA 348

Query: 356 V-LWIGGLVTIISGVI------VLNFSSLFGL----VINFTTV-YSQPIIALLITLIAGW 403
             L  GG V +  G+       V+   ++FGL    + +F T     P+  L I+L  GW
Sbjct: 349 ARLVTGGCVFL--GIFCSLSLGVMKGFTVFGLGMFDLFDFVTAKIMLPLGGLCISLFTGW 406

Query: 404 IWNRNQILSELKQGCPDIENSL---FWKIWPWYVRLVCPVLMLMVF 446
             ++  + SE+       + SL    +K+  + ++ + P+ + ++F
Sbjct: 407 YLDKKIVWSEITN-----DGSLKVPVYKLIIFILKYMAPIAISLIF 447