Pairwise Alignments

Query, 235 a.a., TIGR01621 family pseudouridine synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 301 a.a., RluA family pseudouridine synthase from Rhodanobacter sp000427505 FW510-R12

 Score = 68.9 bits (167), Expect = 1e-16
 Identities = 57/201 (28%), Positives = 88/201 (43%), Gaps = 12/201 (5%)

Query: 4   ILFTHPDFLLINKHPNVSVHKDDGDTM-LLQEVATQTGDGQLYLVHRLDKMTSGILLLAR 62
           I+F    FL+I+K   V+ H   G +   ++ +        L LVHRLD+ TSG+L+ AR
Sbjct: 68  IIFEDKHFLVIDKPAGVASHGGSGVSHGAIELLRAARPQEHLELVHRLDRDTSGVLVFAR 127

Query: 63  NATAASELSQGFAKRKVEKFYLAIGSKKPKKKQGLICGDMERS-RRSSWKLVNSQEN--P 119
                + L        V K YL +    P K +  +   + +S  +   ++V   +N  P
Sbjct: 128 TRAGLTGLQAAIRAGAVTKQYLCLMLGHPAKAKFDVNAPLLKSVLQGGERMVRVADNGKP 187

Query: 120 AITQFFSAAAATGERLFLCKPHTGKTHQIRVALKSIGSAIVGDPIYNTADES-------- 171
           ++T F         RL      TG+THQIRV    IG  + GD  Y   + +        
Sbjct: 188 SLTFFREMEQYPSARLMQATLGTGRTHQIRVHAAHIGHPLAGDAKYGDREMNKRYREMGL 247

Query: 172 DRGYLHAFALRFTYQGEVYQW 192
           +R +LHA  + F   G  Y +
Sbjct: 248 NRMFLHASHMSFDLDGRSYSF 268