Pairwise Alignments

Query, 235 a.a., TIGR01621 family pseudouridine synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 364 a.a., Ribosomal large subunit pseudouridine synthase C from Xanthobacter sp. DMC5

 Score = 77.8 bits (190), Expect = 3e-19
 Identities = 59/169 (34%), Positives = 85/169 (50%), Gaps = 8/169 (4%)

Query: 5   LFTHPDFLLINKHPNVSVHKDDGDTMLLQEV--ATQTGDGQL-YLVHRLDKMTSGILLLA 61
           LF   D +++NK   ++V    G    +  +  A +  DGQ   LVHR+DK TSG LL+A
Sbjct: 129 LFEDKDVMVLNKPFGLAVQGGSGTYRHVDGLLEALKDRDGQKPRLVHRIDKDTSGCLLIA 188

Query: 62  RNATAASELSQGFAKRKVEKFYLAIGSKKPKKKQGLICGDMERSRRSSWKLV----NSQE 117
           ++  AAS L++ F  R+  K Y A+    PK +QG I   + R        V      + 
Sbjct: 189 KSRLAASVLAKSFRSREARKVYWAVVPGVPKPRQGRISTYLARDEDEEKMRVARHGEDEA 248

Query: 118 NPAITQFFSAAAATGERLFL-CKPHTGKTHQIRVALKSIGSAIVGDPIY 165
           + AIT +     A  +  +L  KP TG+THQ+R  L  I   I+GDP Y
Sbjct: 249 SHAITYYAVVDQAAQKMSWLSLKPVTGRTHQLRAHLAHIHHPILGDPKY 297