Pairwise Alignments

Query, 235 a.a., TIGR01621 family pseudouridine synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 211 a.a., pseudouridine synthase from Pseudomonas simiae WCS417

 Score = 70.9 bits (172), Expect = 2e-17
 Identities = 67/203 (33%), Positives = 100/203 (49%), Gaps = 15/203 (7%)

Query: 4   ILFTHPDFLLINKHP---NVSVHKDDGDTMLLQEVATQTGDGQLYLVHRLDKMTSGILLL 60
           IL+     L++NK     +V    DD    L+  +  + G  +  +VHRLD  TSGI+LL
Sbjct: 8   ILYQDDAVLVVNKPTLLLSVPGRADDNKDCLITRLQ-ENGYPEARIVHRLDWETSGIILL 66

Query: 61  ARNATAASELSQGFAKRKVEKFYLAIGSKKPKKKQGLICGDMERSRRSSWKLVNSQE--N 118
           AR+A    ELS+ F  R+ EK Y A+   +P+   G I   +     +  + V   E   
Sbjct: 67  ARDADTHRELSRQFHDRETEKAYTALAWGQPELDSGSIDLPLRYDPPTKPRHVVDHEFGK 126

Query: 119 PAITQFFSAAAATGE--RLFLCKPHTGKTHQIRVALKSIGSAIVGDPIY---NTADESDR 173
            A+T F+      G+  R+ L  P TG++HQ+RV + SIG  ++GD +Y          R
Sbjct: 127 HALT-FWKVLERCGDWCRVEL-TPITGRSHQLRVHMLSIGHPLLGDGLYAHEQALAAWPR 184

Query: 174 GYLHAFALRFTY--QGEVYQWLC 194
             LHA  L FT+   GE  ++ C
Sbjct: 185 LCLHASMLSFTHPQSGERLRFEC 207