Pairwise Alignments

Query, 235 a.a., TIGR01621 family pseudouridine synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 223 a.a., LSU rRNA pseudouridine(746) synthase (EC 5.4.99.29) @ tRNA pseudouridine(32) synthase (EC 5.4.99.28) from Variovorax sp. SCN45

 Score = 67.8 bits (164), Expect = 2e-16
 Identities = 51/152 (33%), Positives = 80/152 (52%), Gaps = 12/152 (7%)

Query: 46  LVHRLDKMTSGILLLARNATAASELSQGFAKRKVEKFYLAI--GSKKPKKKQGLICGD-M 102
           +VHRLD  TSG++++AR       LS  FA+R+V K Y A+  G+     +  +I    M
Sbjct: 52  IVHRLDMGTSGLVVMARGIEMQRALSAAFAERRVHKRYEAVVDGTLPQLDEWSVIDAPLM 111

Query: 103 ERSRRSSWKLVNSQENPAITQFFSAAAATGERL------FLCKPHTGKTHQIRVALKSIG 156
               R   + ++    P++T++ + +A +GE         L +P TG++HQ+RV L SIG
Sbjct: 112 ADWPRRPLQKIDPAGKPSVTRWKAISAWSGEPASSAATHVLLEPLTGRSHQLRVHLLSIG 171

Query: 157 SAIVGDPIYNTA---DESDRGYLHAFALRFTY 185
             I+GD +Y  A     + R  LHA  L F +
Sbjct: 172 HPILGDALYGDAALQARAPRLLLHASELGFVH 203