Pairwise Alignments

Query, 235 a.a., TIGR01621 family pseudouridine synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 559 a.a., RluA family pseudouridine synthase from Vibrio cholerae E7946 ATCC 55056

 Score = 81.3 bits (199), Expect = 4e-20
 Identities = 59/175 (33%), Positives = 87/175 (49%), Gaps = 15/175 (8%)

Query: 18  PNVSVHKDDGDTMLLQEVATQTGDGQLYLVHRLDKMTSGILLLARNATAASELSQGFAKR 77
           P V VH    D++L +  A  T    ++ +HRLD  TSG+L+ A    A  +L + F  R
Sbjct: 378 PGVHVH----DSVLTRLKAQFTQAEGVFALHRLDMSTSGLLVFALTRRANKQLQKQFISR 433

Query: 78  KVEKFYLAIGSKKPKKKQGLI----CGDMERSRRSSWKLVNSQENPAITQFFSAAAATGE 133
            V+K Y+A+   K  + QG I    CGD++   R   K+   Q  PA+T + +       
Sbjct: 434 AVQKRYVALIEGKLSETQGEIQLPLCGDLDDRPRQ--KVCWQQGKPALTHWETVQVEQNR 491

Query: 134 RLFLCKPHTGKTHQIRVALK---SIGSAIVGDPIYNTADESDRGYLHAFALRFTY 185
                 PHTG+THQ+RV       + + IVGD +Y   D+  R +LHA  L F +
Sbjct: 492 TRVYLYPHTGRTHQLRVHCAHHLGLNAPIVGDDLYGLQDK--RLFLHAEQLSFAH 544