Pairwise Alignments

Query, 235 a.a., TIGR01621 family pseudouridine synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 315 a.a., 23S rRNA pseudouridine(955/2504/2580) synthase RluC from Vibrio cholerae E7946 ATCC 55056

 Score = 67.8 bits (164), Expect = 2e-16
 Identities = 56/192 (29%), Positives = 89/192 (46%), Gaps = 10/192 (5%)

Query: 4   ILFTHPDFLLINKHPNVSVHKDDGDTMLLQEV--ATQTGDGQLYLVHRLDKMTSGILLLA 61
           I++     L++NK    +VH   G      E   A +     L LVHR+D+ TSGILL+A
Sbjct: 97  IVYEDDHLLILNKPSGTAVHGGSGLHFGAIEALRALRPQARFLELVHRIDRDTSGILLVA 156

Query: 62  RNATAASELSQGFAKRKVEKFYLAIGSKKPKKKQGLICGDMERSRRSSWKLVNSQENPAI 121
           +  +A   L   F ++ V+K+Y A+       +  ++   + ++  +S   VN    P+ 
Sbjct: 157 KKRSALRHLQAQFREKTVQKYYYALVMGHWDAECKVVNAPLLKNEVNSIVRVNPNGKPSE 216

Query: 122 TQFFSAAAATGERLFLCKPHTGKTHQIRVALKSIGSAIVGDPIYN-------TADES-DR 173
           T+F          L    P TG+THQIRV  + +G  I  D  Y        TA    +R
Sbjct: 217 TRFRILEKFAEATLVQASPVTGRTHQIRVHTQYMGHPIAWDDRYGDRRFDAYTAQFGIER 276

Query: 174 GYLHAFALRFTY 185
            +LHA  ++F +
Sbjct: 277 LFLHAANIQFVH 288