Pairwise Alignments

Query, 235 a.a., TIGR01621 family pseudouridine synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 316 a.a., LSU rRNA pseudouridine(1911/1915/1917) synthase (EC 5.4.99.23) from Sphingobium sp. HT1-2

 Score = 74.3 bits (181), Expect = 3e-18
 Identities = 50/176 (28%), Positives = 84/176 (47%), Gaps = 13/176 (7%)

Query: 3   DILFTHPDFLLINKHPNVSVHKDDGDTM-LLQEVATQTGDGQLY---------LVHRLDK 52
           DI+    D ++++K   + VH   G+    L        DGQL          +VHR+DK
Sbjct: 85  DIVHEDADLIVVDKPAGLVVHPAAGNLDGTLVNALLHHCDGQLSGIGGVARPGIVHRIDK 144

Query: 53  MTSGILLLARNATAASELSQGFAKRKVEKFYLAIGSKKPKKKQGLICGDMERSRRSSWKL 112
            TSG+L++A++  A   L++ F    +++ Y AI    P    G +   + RS     K+
Sbjct: 145 DTSGLLVVAKSDKAHEGLARQFKDHSIDRLYAAIVYGIPAPGSGTVDAWIGRSDADRKKM 204

Query: 113 VNSQENP---AITQFFSAAAATGERLFLCKPHTGKTHQIRVALKSIGSAIVGDPIY 165
              +E     A+T +       G  +  C+  TG+THQ+RV +  +G  ++GDP+Y
Sbjct: 205 AVHREGRGKHAVTHYRVMERLRGAAMVECRLETGRTHQVRVHMAHLGHPLIGDPVY 260