Pairwise Alignments

Query, 235 a.a., TIGR01621 family pseudouridine synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 226 a.a., RNA pseudouridylate synthase from Sphingobium sp. HT1-2

 Score = 86.3 bits (212), Expect = 5e-22
 Identities = 59/169 (34%), Positives = 88/169 (52%), Gaps = 7/169 (4%)

Query: 4   ILFTHPDFLLINKHPNVSVHKD-DGDTMLLQEVATQTGDGQLY--LVHRLDKMTSGILLL 60
           +LF   + ++++K   + V    DG   L   +A+ T   Q +   VHRLD+ TSG LLL
Sbjct: 8   VLFIDGEAIILDKPAGLPVDAPRDGSIALENHLASLTFGFQRWPLAVHRLDRDTSGCLLL 67

Query: 61  ARNATAASELSQGFAKRKVEKFYLAIGSKKPKKKQGLICGDMERSRRSS--WKLVNSQE- 117
           ARN  A    +  F    VEK Y+A+    P+  +G I   +++    S  W+++ ++  
Sbjct: 68  ARNPKAHKRFAAAFEAGTVEKRYVAVLEGVPEADEGTIALSLKKVSTPSQGWRMIAAKAG 127

Query: 118 NPAITQFFSAAAATGERLFLCKPHTGKTHQIRV-ALKSIGSAIVGDPIY 165
            PA+T +   A   G  L    P TG+THQIRV A   +G  IVGDP+Y
Sbjct: 128 KPAVTHWRKLAVKDGRALIAFTPETGRTHQIRVHAQHGLGFGIVGDPVY 176