Pairwise Alignments

Query, 235 a.a., TIGR01621 family pseudouridine synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 318 a.a., ribosomal large subunit pseudouridine synthase C from Pseudomonas putida KT2440

 Score = 66.2 bits (160), Expect = 7e-16
 Identities = 55/192 (28%), Positives = 89/192 (46%), Gaps = 14/192 (7%)

Query: 4   ILFTHPDFLLINKHPNVSVHKDDGDTMLLQEVATQTGDG--QLYLVHRLDKMTSGILLLA 61
           I++     +++NK   ++VH   G +  + E   Q      +L LVHRLD+ TSG+L++A
Sbjct: 97  IVYEDKALIVMNKPAGIAVHGGSGLSFGVIEALRQLRPDAKELELVHRLDRDTSGLLMIA 156

Query: 62  RNATAASELSQGFAKRKVEKFYLA-IGSKKPKKKQGLICGDMERSRRSSWKLVN-SQENP 119
           +  +    L        V+K Y+A +    P  K+ +    ++ + RS  ++V  ++E  
Sbjct: 157 KKRSMLRHLHAALRGDGVDKRYMALVRGHWPTSKKQVNAPLLKSNLRSGERMVEVNEEGK 216

Query: 120 AITQFFSAAAATGE--RLFLCKPHTGKTHQIRVALKSIGSAIVGDPIYNTADES------ 171
                F      G+   +   +P TG+THQIRV     G  I GD  Y   D S      
Sbjct: 217 EALTLFRVLRRFGDFATIVEARPITGRTHQIRVHTLHAGHMIAGDSKYGDEDFSREIREL 276

Query: 172 --DRGYLHAFAL 181
              R +LHA+AL
Sbjct: 277 GGKRLFLHAYAL 288