Pairwise Alignments

Query, 235 a.a., TIGR01621 family pseudouridine synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 211 a.a., 23S rRNA (746) and tRNA (32) pseudouridine synthase from Pseudomonas putida KT2440

 Score = 72.4 bits (176), Expect = 6e-18
 Identities = 60/190 (31%), Positives = 93/190 (48%), Gaps = 9/190 (4%)

Query: 4   ILFTHPDFLLINKHP---NVSVHKDDGDTMLLQEVATQTGDGQLYLVHRLDKMTSGILLL 60
           ILF     L+INK     +V    +D    L+  +  + G     +VHRLD  TSGI+LL
Sbjct: 8   ILFEDAAILVINKPTLLLSVPGRAEDNKDCLITRLQ-ENGYPDALIVHRLDWETSGIILL 66

Query: 61  ARNATAASELSQGFAKRKVEKFYLAIGSKKPKKKQGLICGDMERSRRSSWK-LVNSQENP 119
           AR+A +  ELS+ F  R+ EK Y A+   +P    G I   +     +  + +V+ ++  
Sbjct: 67  ARDADSHRELSRQFHDRETEKAYTALCWGQPALDSGSIDLPLRYDPPTKPRHVVDHEQGK 126

Query: 120 AITQFFSAAAATGERLFL-CKPHTGKTHQIRVALKSIGSAIVGDPIY---NTADESDRGY 175
               F+      G+   +   P TG++HQ+RV + SIG  ++GD +Y         +R  
Sbjct: 127 HALTFWRIVERCGDHCRVELTPITGRSHQLRVHMLSIGHPLLGDRLYANPQALAAHERLC 186

Query: 176 LHAFALRFTY 185
           LHA  L FT+
Sbjct: 187 LHASMLSFTH 196