Pairwise Alignments

Query, 235 a.a., TIGR01621 family pseudouridine synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 225 a.a., RNA pseudouridine synthase from Pontibacter actiniarum KMM 6156, DSM 19842

 Score = 82.0 bits (201), Expect = 9e-21
 Identities = 60/200 (30%), Positives = 103/200 (51%), Gaps = 16/200 (8%)

Query: 1   MFDILFTHPDFLLINKHPNVSVHKDDGDTMLLQEVA--------TQTGDGQLYLVHRLDK 52
           M ++L+     L +NK   + VH D+   + L  +A         + G+  + +VHRLD+
Sbjct: 1   MLEVLYEDNHVLAVNKPAGLLVHGDETGDITLAHLAKDYIRHKYNKPGNVFIGVVHRLDR 60

Query: 53  MTSGILLLARNATAASELSQGFAKRKVEKFYLAIGSKKPKKKQGLICGDMERSRRSSWKL 112
             SG++LLA+ + A + L++ F  +K  K Y A+   +PK++QG +   + +    +   
Sbjct: 61  PVSGVVLLAKTSKALTRLNELFRSKKTTKTYWAVVQNRPKQEQGNLVHWLVKDSSRNVTK 120

Query: 113 VNSQENPAITQ----FFSAAAATGERLFLCKPHTGKTHQIRVALKSIGSAIVGDPIYNTA 168
             ++ENPA ++    +   +   G+ L    P TG+ HQIRV L S+   I+GD  Y  A
Sbjct: 121 AYAKENPAGSRSELNYRLLSMQHGKHLLEVNPITGRPHQIRVQLSSMRCPILGDLKYG-A 179

Query: 169 DE--SDRGY-LHAFALRFTY 185
           D+   D+   LHA  L+F +
Sbjct: 180 DQPLPDKSIALHARRLQFDH 199