Pairwise Alignments

Query, 235 a.a., TIGR01621 family pseudouridine synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 344 a.a., RNA pseudouridine synthase from Pontibacter actiniarum KMM 6156, DSM 19842

 Score = 77.8 bits (190), Expect = 3e-19
 Identities = 67/240 (27%), Positives = 106/240 (44%), Gaps = 36/240 (15%)

Query: 3   DILFTHPDFLLINKHPNVSVHKDDGD---------TMLLQEVAT-QTGDGQLYLVHRLDK 52
           DI++   + LL+NK   + VH    +         T  LQ + T + G+G+  LVHR+DK
Sbjct: 98  DIIYEDDELLLVNKAAGMVVHPAYNNWNGTLVNALTYHLQNLPTHRNGEGRPGLVHRIDK 157

Query: 53  MTSGILLLARNATAASELSQGFAKRKVEKFYLAIGSKKPKKKQGLICGDMERSRRSSWKL 112
            TSG+L++A+   + + L++ F    +E+ Y A+    PK+++G I G + RS +    +
Sbjct: 158 DTSGLLVIAKTDYSMAYLAKQFFDHSIERTYYALVWGVPKEQKGTITGHVGRSAKDRKVM 217

Query: 113 ----VNSQENPAITQFFSAAAATGERLFLCKPHTGKTHQIRVALKSIGSAIVGDPIY--- 165
                      A+T +    +     L  C   TG+THQIR  +K IG  +  D  Y   
Sbjct: 218 AVYPAGDYGKHAVTHYKVLRSFRYVSLVQCNLETGRTHQIRAHMKHIGHPLFSDATYGGD 277

Query: 166 ----------------NTADESDRGYLHAFALRFTYQG--EVYQWLCD-PRQFSHLGQKW 206
                           N      R  LHA +L F +    E  Q+  D P  F  + +KW
Sbjct: 278 KILYGMPNGTYKSFVENAFKLMPRQALHAKSLGFLHPDTKEFMQFNSDLPEDFRAVLEKW 337