Pairwise Alignments

Query, 235 a.a., TIGR01621 family pseudouridine synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 336 a.a., Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 67.8 bits (164), Expect = 3e-16
 Identities = 62/202 (30%), Positives = 91/202 (45%), Gaps = 16/202 (7%)

Query: 3   DILFTHPDFLLINKHPNVSVHKDDGD---TMLLQEVATQTGDGQLY---LVHRLDKMTSG 56
           D+++   D L+I K   + VH   G    T+L   +A   G   L    +VHRLDK TSG
Sbjct: 101 DVVYEDADLLVIQKPAGLVVHPAAGHWTGTLLNGLLAHHAGAASLPRAGIVHRLDKDTSG 160

Query: 57  ILLLARNATAASELSQGFAKRKVEKFYLAI------GSKKPKKKQGLICGDMERSRRSSW 110
           ++L+ ++  A   L +  A R+V + YLA+      G+ +    Q +      R R +  
Sbjct: 161 LMLVGKSRQAVEALVRAIAAREVNRQYLALAHGRWQGAAEKGVDQPIGRDVHNRLRMAVV 220

Query: 111 KLVNSQENPAITQFFSAAAATGERLFLCKPHTGKTHQIRVALKSIGSAIVGDPIY--NTA 168
           +        A T       +    L  CK HTG+THQIRV +  +G  +V D +Y     
Sbjct: 221 RPDTGIGKAAQTTIRLLDTSDQACLVACKLHTGRTHQIRVHMAWLGHPLVADTLYGGRAL 280

Query: 169 DESDRGYLHA--FALRFTYQGE 188
              DR  LHA   +LR    GE
Sbjct: 281 WGIDRQALHAARLSLRHPITGE 302