Pairwise Alignments

Query, 235 a.a., TIGR01621 family pseudouridine synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 329 a.a., Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 72.0 bits (175), Expect = 1e-17
 Identities = 68/212 (32%), Positives = 92/212 (43%), Gaps = 28/212 (13%)

Query: 2   FDILFTHPDFLLINKHPNVSVHKDDGDTMLLQEVATQTGDGQ--LYLVHRLDKMTSGILL 59
           F ++F    FL I+K   V+VH   G +  + E   Q       L LVHRLD+ TSG+LL
Sbjct: 92  FPVVFEDEAFLAIDKPAGVAVHGGSGVSFGVIEQMRQARPQARLLELVHRLDRETSGLLL 151

Query: 60  LARNATAASELSQGFAKRKVEKFYLA-IGSKKPKKKQGL-------ICGDMERSRR---- 107
           +A+  +A   L   F +R+  K YLA +    P + + L       +  D ER  R    
Sbjct: 152 IAKKKSALKALQDQFRERETGKTYLALVKGVWPARLKVLDQPLHKYLLPDGERRVRVTTP 211

Query: 108 ------SSWKLVNSQENPAITQFFSAAAATGERLFLCKPHTGKTHQIRVALKSIGSAIVG 161
                  S  LV   +         A A  G  L      TG+THQIRV L S G  I G
Sbjct: 212 DDPDGMCSVTLVKVAQRVPAPPGLEAGAPEGFSLLEVTIKTGRTHQIRVHLSSAGHPIAG 271

Query: 162 DPIYNTADES--------DRGYLHAFALRFTY 185
           D  Y   + +         R +LHA+ LR T+
Sbjct: 272 DDKYGDFELNRQLARIGLKRMFLHAWRLRLTH 303