Pairwise Alignments

Query, 235 a.a., TIGR01621 family pseudouridine synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 229 a.a., RNA pseudouridine synthase from Magnetospirillum magneticum AMB-1

 Score = 79.0 bits (193), Expect = 7e-20
 Identities = 54/183 (29%), Positives = 91/183 (49%), Gaps = 7/183 (3%)

Query: 4   ILFTHPDFLLINKHPNVSVHK--DDGDTMLLQEVATQTGDGQL-YLVHRLDKMTSGILLL 60
           +L+   D ++++K   ++VH   +  D + L   A   G  ++  L HRLD+ TSG L+L
Sbjct: 10  VLYKDQDVIVLDKPAGLAVHAGPNSPDHLELYLGALAFGWAEMPKLAHRLDRDTSGCLIL 69

Query: 61  ARNATAASELSQGFAKRKVEKFYLAIGSKKPKKKQGLICGDMER--SRRSSWKL-VNSQE 117
            R+A A   L + F  R+VEK Y ++    P    G +   + +  +R   W++ V+   
Sbjct: 70  GRHAKAIKRLGKMFEHRRVEKVYWSVSHGSPAADSGTVDAPLLKVSARGQGWRIKVDPAG 129

Query: 118 NPAITQFFSAAAATGERLFLCKPHTGKTHQIRVALKSIGSAIVGDPIYNTADESDRGYLH 177
            P+IT +     + G      +P TG+THQIR+  + +G  ++GD  Y   D   +  LH
Sbjct: 130 QPSITDWSVLGRSDGLSWIEWRPRTGRTHQIRIHAQYLGCPLLGDAYYG-PDPEPKVRLH 188

Query: 178 AFA 180
             A
Sbjct: 189 LLA 191