Pairwise Alignments

Query, 235 a.a., TIGR01621 family pseudouridine synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 225 a.a., RNA pseudouridine synthase from Magnetospirillum magneticum AMB-1

 Score = 83.6 bits (205), Expect = 3e-21
 Identities = 60/183 (32%), Positives = 95/183 (51%), Gaps = 8/183 (4%)

Query: 4   ILFTHPDFLLINKHPNVSVHKDD--GDTMLLQEVATQTG-DGQLYLVHRLDKMTSGILLL 60
           +L+  P  L+I+K   ++VH     G+ ++L   A   G   +  L HRLD+ TSG L+L
Sbjct: 7   LLYRDPAVLIIDKPAGLAVHAGPKGGEHLMLYLDALSFGLKRRPELAHRLDRETSGCLVL 66

Query: 61  ARNATAASELSQGFAKRKVEKFYLAIGSKKPKKKQGLICGDM-ERSRRSSWKLVNSQENP 119
            R + A + L + FAK   +K Y A+   KP++ QG+I   + +R ++  W++   +   
Sbjct: 67  GRTSKALAGLGELFAKGLADKTYWAVVVGKPREDQGVIDYALKKREKKFGWRMEVDRTGL 126

Query: 120 AITQFFSAAAATGERLFL-CKPHTGKTHQIRVALKSIGSAIVGDPIYNTAD---ESDRGY 175
           A    +    + G   +L C+P TG+THQIR    +IG  +VGD IY         DR  
Sbjct: 127 ASVTQWRLLGSDGRLSWLECRPLTGRTHQIRAHCAAIGHPLVGDSIYGRGTGTLAGDRLM 186

Query: 176 LHA 178
           LH+
Sbjct: 187 LHS 189