Pairwise Alignments

Query, 235 a.a., TIGR01621 family pseudouridine synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 327 a.a., RluA family pseudouridine synthase from Magnetospirillum magneticum AMB-1

 Score = 80.1 bits (196), Expect = 5e-20
 Identities = 55/176 (31%), Positives = 90/176 (51%), Gaps = 14/176 (7%)

Query: 4   ILFTHPDFLLINKHPNVSVHKDDG--DTMLLQEVATQTGDG--------QLYLVHRLDKM 53
           +++   D ++I+K   + VH   G  D  L+  +    G+         +  +VHR+DK 
Sbjct: 89  VVYEDEDLIVIDKPAGMVVHPAPGNPDETLVNALLAHCGESLAGIGGVKRPGIVHRIDKD 148

Query: 54  TSGILLLARNATAASELSQGFAKRKVEKFYLAIGSKKPKKKQGLICGDMER--SRRSSWK 111
           TSG+L+ A+   A   L+  FA   +E+ Y A+    P  +QG I G++ R  + R    
Sbjct: 149 TSGLLVAAKTDAAHRGLATQFAAHTLERAYWALVWGTPSPRQGEIEGNIGRNPNDRKKMA 208

Query: 112 LVNSQENPAITQF--FSAAAATGERLFLCKPHTGKTHQIRVALKSIGSAIVGDPIY 165
           +V S   PA+T++    + A     L  C+  TG+THQIRV + + G  +VGDP+Y
Sbjct: 209 VVKSGGKPALTRYRVLKSFAGGAVSLVECRLATGRTHQIRVHMTTQGHPLVGDPVY 264