Pairwise Alignments

Query, 235 a.a., TIGR01621 family pseudouridine synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 219 a.a., pseudouridine synthase for 23S rRNA (position 746) and tRNAphe(position 32) (NCBI) from Escherichia coli BW25113

 Score = 65.5 bits (158), Expect = 8e-16
 Identities = 55/195 (28%), Positives = 91/195 (46%), Gaps = 19/195 (9%)

Query: 4   ILFTHPDFLLINKHPNV-------SVHKDDGDTMLLQEVATQTGDGQLYLVHRLDKMTSG 56
           IL+     +++NK   +         HKD   T + ++        Q   VHRLD  TSG
Sbjct: 16  ILYQDDHIMVVNKPSGLLSVPGRLEEHKDSVMTRIQRDYP------QAESVHRLDMATSG 69

Query: 57  ILLLARNATAASELSQGFAKRKVEKFYLAIGSKKPKKKQGLICGDM--ERSRRSSWKLVN 114
           ++++A    A  EL + F +R+ +K Y+A     P   +GL+   +  +   R   K+  
Sbjct: 70  VIVVALTKAAERELKRQFREREPKKQYVARVWGHPSPAEGLVDLPLICDWPNRPKQKVCY 129

Query: 115 SQENPAITQF-FSAAAATGERLFLCKPHTGKTHQIRVALKSIGSAIVGDPIYNTADE--- 170
               PA T++     AA      + KP TG++HQ+RV + ++G  I+GD  Y + +    
Sbjct: 130 ETGKPAQTEYEVVEYAADNTARVVLKPITGRSHQLRVHMLALGHPILGDRFYASPEARAM 189

Query: 171 SDRGYLHAFALRFTY 185
           + R  LHA  L  T+
Sbjct: 190 APRLLLHAEMLTITH 204