Pairwise Alignments

Query, 235 a.a., TIGR01621 family pseudouridine synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 315 a.a., pseudouridine synthase, RluA family from Enterobacter asburiae PDN3

 Score = 69.3 bits (168), Expect = 8e-17
 Identities = 60/201 (29%), Positives = 96/201 (47%), Gaps = 15/201 (7%)

Query: 4   ILFTHPDFLLINKHPNVSVHKDDGDTMLLQEV--ATQTGDGQLYLVHRLDKMTSGILLLA 61
           IL+     L++NK    +VH   G +  + E   A +     L LVHRLD+ TSG+LL+A
Sbjct: 95  ILYEDDHILVLNKPSGTAVHGGSGLSFGVIEGLRALRPEARFLELVHRLDRDTSGVLLVA 154

Query: 62  RNATAASELSQGFAKRKVEKFYLAIGSKKPKKKQGLICGDMERSRRSSWK---LVNSQEN 118
           +  +A   L +   ++ ++K YLA+   + +    ++   + ++   S +    V+ +  
Sbjct: 155 KKRSALRSLHEQLREKGMQKDYLALVRGQWQSHVKVVQAPLLKNILQSGERIVRVSQEGK 214

Query: 119 PAITQFFSAAAATGERLFLCKPHTGKTHQIRVALKSIGSAIVGDPIYNTADES------- 171
           P+ T+F          L  C P TG+THQIRV  +  G  I  D  Y   +         
Sbjct: 215 PSETRFKVEERYEFATLVRCSPVTGRTHQIRVHTQFAGHPIAFDDRYGDREFDKQLAGTG 274

Query: 172 -DRGYLHAFALRFTY--QGEV 189
             R +LHA AL+FT+   GEV
Sbjct: 275 LSRLFLHAAALKFTHPNTGEV 295