Pairwise Alignments

Query, 235 a.a., TIGR01621 family pseudouridine synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 219 a.a., bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA from Escherichia coli ECRC62

 Score = 65.5 bits (158), Expect = 8e-16
 Identities = 55/195 (28%), Positives = 91/195 (46%), Gaps = 19/195 (9%)

Query: 4   ILFTHPDFLLINKHPNV-------SVHKDDGDTMLLQEVATQTGDGQLYLVHRLDKMTSG 56
           IL+     +++NK   +         HKD   T + ++        Q   VHRLD  TSG
Sbjct: 16  ILYQDDHIMVVNKPSGLLSVPGRLEEHKDSVMTRIQRDYP------QAESVHRLDMATSG 69

Query: 57  ILLLARNATAASELSQGFAKRKVEKFYLAIGSKKPKKKQGLICGDM--ERSRRSSWKLVN 114
           ++++A    A  EL + F +R+ +K Y+A     P   +GL+   +  +   R   K+  
Sbjct: 70  VIVVALTKAAERELKRQFREREPKKQYVARVWGHPSPAEGLVDLPLICDWPNRPKQKVCY 129

Query: 115 SQENPAITQF-FSAAAATGERLFLCKPHTGKTHQIRVALKSIGSAIVGDPIYNTADE--- 170
               PA T++     AA      + KP TG++HQ+RV + ++G  I+GD  Y + +    
Sbjct: 130 ETGKPAQTEYEVVEYAADNTARVVLKPITGRSHQLRVHMLALGHPILGDRFYASPEARAM 189

Query: 171 SDRGYLHAFALRFTY 185
           + R  LHA  L  T+
Sbjct: 190 APRLLLHAEMLTITH 204