Pairwise Alignments

Query, 235 a.a., TIGR01621 family pseudouridine synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 325 a.a., 23S rRNA pseudouridine(1911/1915/1917) synthase RluD from Dickeya dianthicola ME23

 Score = 68.6 bits (166), Expect = 1e-16
 Identities = 52/186 (27%), Positives = 85/186 (45%), Gaps = 12/186 (6%)

Query: 3   DILFTHPDFLLINKHPNVSVHKDDGD------TMLLQEVATQTGDGQLYLVHRLDKMTSG 56
           DI++   D L+INK  N+ VH   G+        LL          +  +VHRLDK T+G
Sbjct: 85  DIVYEDGDILVINKPRNLVVHPGAGNPDGTVLNALLHHYPEIVDVPRAGIVHRLDKDTTG 144

Query: 57  ILLLARNATAASELSQGFAKRKVEKFY--LAIGSKKPKKKQGLICGDMER-SRRSSWKLV 113
           ++++A+   A + L +    R++ + Y  +AIG+       G +   + R S + +   V
Sbjct: 145 LMVVAKTVPAQTRLVESLQAREITREYEAVAIGTMTAG---GTVEEPIARHSTKRTHMAV 201

Query: 114 NSQENPAITQFFSAAAATGERLFLCKPHTGKTHQIRVALKSIGSAIVGDPIYNTADESDR 173
           +    PA+T +              +  TG+THQIRV +  I   +VGDP+Y       +
Sbjct: 202 HPMGKPAVTHYRIMEHFRAHTRLRLRLETGRTHQIRVHMAHINHPLVGDPLYGGRPRLPK 261

Query: 174 GYLHAF 179
           G    F
Sbjct: 262 GASETF 267