Pairwise Alignments

Query, 235 a.a., TIGR01621 family pseudouridine synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 235 a.a., Pseudouridylate synthases, 23S RNA-specific from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 64.3 bits (155), Expect = 2e-15
 Identities = 49/174 (28%), Positives = 80/174 (45%), Gaps = 19/174 (10%)

Query: 3   DILFTHPDFLLINKHPNVSVH-----KDDGDTMLLQEVATQTGDGQLYLVHRLDKMTSGI 57
           +ILF    ++ +NK   V VH     KDD     +Q +  Q G   +Y +HR+D+ TSG+
Sbjct: 5   EILFEDEHYIAVNKPAGVMVHRSSIAKDDDPIYAMQVLRDQMGH-HVYPLHRIDRPTSGV 63

Query: 58  LLLARNATAASELSQGFAKRKVEKFYLAIGSKKPKKKQGLICGDMERS-------RRSSW 110
           L  ARN        + F  + + K YL +     K+ +G+I   + ++        ++ +
Sbjct: 64  LWFARNPDVVPAFQEQFINQNIRKSYLTVVRGYTKEAKGIIDYPLRKNLKKELQEAQTEY 123

Query: 111 KLVNSQENPAITQFFSAAAATGERLFLCKPH--TGKTHQIRVALKSIGSAIVGD 162
           + +   E P    F S+      R  L + H  TG+ HQIR  L    + I+GD
Sbjct: 124 ERIGQVEIP----FQSSPRHDTSRYSLVRAHPLTGRMHQIRRHLAHERNYIIGD 173