Pairwise Alignments

Query, 235 a.a., TIGR01621 family pseudouridine synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 364 a.a., pseudouridine synthase, RluA family from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 68.2 bits (165), Expect = 2e-16
 Identities = 50/177 (28%), Positives = 86/177 (48%), Gaps = 14/177 (7%)

Query: 3   DILFTHPDFLLINKHPNVSVHKDDGD---TML------LQEVATQTGD-GQLYLVHRLDK 52
           DI+      L++NK   + VH   G+   T++        ++    G+ G+  LVHR+DK
Sbjct: 117 DIVHEDDHLLVVNKPAGMVVHPAYGNWTGTLVNGLVYHFSQLPEMPGNSGRPGLVHRIDK 176

Query: 53  MTSGILLLARNATAASELSQGFAKRKVEKFYLAIGSKKPKKKQGLICGDMERSRRSSWKL 112
            TSG+L++A++  A + L++ F    +E+ Y+A+   +P++  G I   + RS R    +
Sbjct: 177 DTSGLLVIAKSEQAMTGLAKQFFDHSIERTYIALVWGEPQEDAGTIDAHVGRSARDRKVM 236

Query: 113 ----VNSQENPAITQFFSAAAATGERLFLCKPHTGKTHQIRVALKSIGSAIVGDPIY 165
                  Q   A+T +          L  C   TG+THQIR  +K +G  +  D +Y
Sbjct: 237 DVFPEGDQGKNAVTHWKVLKRLRYVSLVQCNLETGRTHQIRAHMKYLGHPLFNDAVY 293