Pairwise Alignments

Query, 235 a.a., TIGR01621 family pseudouridine synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 244 a.a., Pseudouridylate synthases, 23S RNA-specific from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 73.9 bits (180), Expect = 3e-18
 Identities = 59/198 (29%), Positives = 91/198 (45%), Gaps = 14/198 (7%)

Query: 2   FDILFTHPDFLLINKHPNVSVHKDD-GDTML-------LQEVATQTGDGQLYLVHRLDKM 53
           F +++     L++NKH  V V  D  GD  L       + E   + G   L+ VHR+D+ 
Sbjct: 6   FTVVYEDNHLLVVNKHAGVLVQGDHTGDKTLTDYCKAYIAEKYDKPGAVFLHPVHRIDRP 65

Query: 54  TSGILLLARNATAASELSQGFAKRKVEKFYLAIGSKKPKKKQGLIC----GDMERSRRSS 109
            SG+++ AR + A   +   F KR+V K Y AI  K+PK++ G +      D  R+  ++
Sbjct: 66  VSGLVVFARTSKALERMMVLFKKREVHKVYWAIVKKRPKEEIGKLTHYLKKDESRNVTTA 125

Query: 110 WKLVNSQENPAITQFFSAAAATGERLFLCKPHTGKTHQIRVALKSIGSAIVGDPIYNTAD 169
           +         A   +          L   +P TG+ HQIRV L ++G  I GD  Y  + 
Sbjct: 126 YDKEVEGSKRAELDYKRLGKLNDHWLVEVRPKTGRPHQIRVQLAAMGCPIRGDLRYGFSK 185

Query: 170 ESDRG--YLHAFALRFTY 185
            +      LHAF L F +
Sbjct: 186 PNPDASINLHAFHLIFVH 203