Pairwise Alignments

Query, 235 a.a., TIGR01621 family pseudouridine synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 235 a.a., Pseudouridylate synthases, 23S RNA-specific from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 83.2 bits (204), Expect = 4e-21
 Identities = 55/163 (33%), Positives = 86/163 (52%), Gaps = 4/163 (2%)

Query: 4   ILFTHPDFLLINKHPNVSVHKDDGDTMLLQEVATQ-TGDGQLYLVHRLDKMTSGILLLAR 62
           +LF + D+++INK P +S   D  +   + ++A     D Q+   HRLDK TSG L++A+
Sbjct: 10  MLFQNDDYIVINKPPYLSTLDDRHERQNILDLARDYIPDAQM--CHRLDKETSGCLVIAK 67

Query: 63  NATAASELSQGFAKRKVEKFYLAIGSKKPKKKQGLICGDMERSRRSSWKLVNSQENPAIT 122
           N  A   ++  F  RKVEK Y A+        Q L+  ++  + +   K ++ +  PA T
Sbjct: 68  NPDAYRNIAIQFEHRKVEKIYHAVAEGIHDYDQKLVDRNLVATNQGIAK-ISLKGKPATT 126

Query: 123 QFFSAAAATGERLFLCKPHTGKTHQIRVALKSIGSAIVGDPIY 165
            F +        L  CKP +G+ HQIRV L  +G+ I GD +Y
Sbjct: 127 YFTTLKTYAMHSLIECKPVSGRLHQIRVHLAYLGAPICGDEMY 169