Pairwise Alignments

Query, 235 a.a., TIGR01621 family pseudouridine synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 356 a.a., RluA family pseudouridine synthase from Bacteroides stercoris CC31F

 Score = 70.9 bits (172), Expect = 3e-17
 Identities = 66/249 (26%), Positives = 104/249 (41%), Gaps = 35/249 (14%)

Query: 3   DILFTHPDFLLINKHPNVSVHKDDGDTM--LLQEVATQ--------TGDGQLYLVHRLDK 52
           DI++     +++NK   + VH   G+    L+  +A            D  + LVHR+DK
Sbjct: 108 DIVYEDKYLMVVNKPAGLVVHPGHGNYRGTLVNAIAWHMKDIPDYDANDPHVGLVHRIDK 167

Query: 53  MTSGILLLARNATAASELSQGFAKRKVEKFYLAIGSKKPKKKQGLICGDMERS---RRSS 109
            TSG+L++A+   A + L   F  +  ++ Y A+     ++ +G I G++ R+   R   
Sbjct: 168 DTSGLLVIAKTPDAKTNLGLQFFNKTTKRRYRALVWGNVEQDEGTIVGNVGRNPKDRMQM 227

Query: 110 WKLVNSQENPAITQFFSAAAATGERLFLCKPHTGKTHQIRVALKSIGSAIVGDPIY---- 165
             L + Q   A+T +          L  C   TG+THQIRV +K IG  +  D  Y    
Sbjct: 228 TVLPDDQGKHAVTHYRVLERLGYVTLVECVLETGRTHQIRVHMKHIGHILFNDERYGGHE 287

Query: 166 ---------------NTADESDRGYLHAFALRFTY--QGEVYQWLCD-PRQFSHLGQKWH 207
                          N  D   R  LHA  L F +   GE   +  + P   + L  KW 
Sbjct: 288 ILKGTHFAKYKQFVNNCFDICPRQALHAMTLGFVHPVTGEEMYFTSELPDDMNRLLDKWR 347

Query: 208 EEAVNQGIE 216
               N+ +E
Sbjct: 348 GYISNRELE 356