Pairwise Alignments

Query, 235 a.a., TIGR01621 family pseudouridine synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 357 a.a., pseudouridine synthase, RluA family from Bacteroides ovatus ATCC 8483

 Score = 70.1 bits (170), Expect = 5e-17
 Identities = 64/249 (25%), Positives = 105/249 (42%), Gaps = 36/249 (14%)

Query: 4   ILFTHPDFLLINKHPNVSVHKDDGDT--MLLQEVATQ--------TGDGQLYLVHRLDKM 53
           I++  P  +++NK   + VH   G+    L+  +A            D  + LVHR+DK 
Sbjct: 109 IVYEDPYLMVVNKPAGLVVHPGHGNYHGTLVNALAWHMKDIPDYDANDPHVGLVHRIDKD 168

Query: 54  TSGILLLARNATAASELSQGFAKRKVEKFYLAIGSKKPKKKQGLICGDMERSRRSSWKLV 113
           TSG+L++A+   A + L   F  +  ++ Y A+     ++ +G I G++ R+ R   ++ 
Sbjct: 169 TSGLLVIAKTPDAKTNLGIQFFNKTTKRKYRALVWGVMEQDEGTIVGNIARNPRDRMQMA 228

Query: 114 NSQE----NPAITQFFSAAAATGERLFLCKPHTGKTHQIRVALKSIGSAIVGDPIY---- 165
              +      A+T +          L  C   TG+THQIRV +K IG  +  D  Y    
Sbjct: 229 VMSDPTVGKHAVTHYRVLERLGYVTLVECILETGRTHQIRVHMKHIGHVLFNDERYGGHE 288

Query: 166 ---------------NTADESDRGYLHAFALRFTY--QGEVYQWLCD-PRQFSHLGQKWH 207
                          N  D   R  LHA  L F +   GE   +  + P   + L +KW 
Sbjct: 289 ILKGTHFSKYKQFVNNCFDTCPRQALHAMTLGFVHPVTGEEMYFTSELPDDMTRLIEKWR 348

Query: 208 EEAVNQGIE 216
               N+ +E
Sbjct: 349 GYISNRELE 357