Pairwise Alignments

Query, 235 a.a., TIGR01621 family pseudouridine synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 329 a.a., ribosomal large subunit pseudouridine synthase C from Agrobacterium fabrum C58

 Score = 66.6 bits (161), Expect = 6e-16
 Identities = 55/175 (31%), Positives = 83/175 (47%), Gaps = 16/175 (9%)

Query: 4   ILFTHPDFLLINKHPNVSVHKDDGDTMLLQEVATQTGDGQLYLVHRLDKMTSGILLLARN 63
           ++F  P  + +     V+ H D      L E  T     +  LVHRLD+ TSG+L++AR 
Sbjct: 104 LVFNKPAGIAVQGGSGVNRHIDG-----LLEAWTSPKGEKPRLVHRLDRDTSGVLVVART 158

Query: 64  ATAASELSQGFAKRKVEKFYLAIGSKKPKKKQGLI--------CGDMERSRRSSWKLVNS 115
             AA +L+  F +R  +K Y A+    P+K Q  I          D +R R +  K    
Sbjct: 159 RGAAQKLTAAFRERDTKKTYWALVRGVPRKHQDKISTWLVKEQTPDGDRMRIA--KHGEE 216

Query: 116 QENPAITQFFSAAAATGERLFL-CKPHTGKTHQIRVALKSIGSAIVGDPIYNTAD 169
             + AI+ +     A     +L  +P+TG+THQ+RV    +G  I+GDP Y   D
Sbjct: 217 GADHAISYYRVIDTAAQNLAWLEMEPYTGRTHQLRVHALHMGHPIIGDPKYYIDD 271