Pairwise Alignments

Query, 235 a.a., TIGR01621 family pseudouridine synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 312 a.a., Ribosomal large subunit pseudouridine synthase C from Acinetobacter radioresistens SK82

 Score = 70.5 bits (171), Expect = 4e-17
 Identities = 48/171 (28%), Positives = 83/171 (48%), Gaps = 4/171 (2%)

Query: 4   ILFTHPDFLLINKHPNVSVHKDDGDTM-LLQEVATQTGDGQLYLVHRLDKMTSGILLLAR 62
           +++     +++NK   ++VH   G    L++ +   TG   L LVHR+D+ TSG++++++
Sbjct: 97  VIYEDEGLMVVNKPSGIAVHGGSGVAYGLIEGLRAATGKKYLELVHRIDRDTSGLVMISK 156

Query: 63  NATAASELSQGFAKRKVEKFYLAIGSKKPKKKQGLICGDMERSRRSSWK---LVNSQENP 119
             +    L     + K++K Y AI   +    Q LI   + R   ++ +    V+ +   
Sbjct: 157 KRSVLKTLQDLLREHKIKKTYAAIVKGQVSLDQQLIDAPLYRYELANGERRVRVSKEGKD 216

Query: 120 AITQFFSAAAATGERLFLCKPHTGKTHQIRVALKSIGSAIVGDPIYNTADE 170
           + TQ+  A       L    P +G+THQIRV   SIG  +VGD  Y    E
Sbjct: 217 SKTQWNVAERFMHATLVYASPLSGRTHQIRVHGLSIGHPLVGDDKYGHETE 267