Pairwise Alignments

Query, 220 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 351 a.a., Spermidine/putrescine import ATP-binding protein PotA from Xanthobacter sp. DMC5

 Score =  135 bits (341), Expect = 7e-37
 Identities = 75/199 (37%), Positives = 118/199 (59%), Gaps = 5/199 (2%)

Query: 10  ILKQDGHCLLAEFNLTIAEGEIVSLMGPSGCGKSTLLSVIAGHLATDFTFQGSMKLGDTQ 69
           + + D    +   +LTI+EGE+V+L+GPSGCGK+T L ++ G +      +G + +G   
Sbjct: 10  VKRYDAMTAVDHVSLTISEGELVALLGPSGCGKTTTLRMVGGFIPVT---EGRILVGGRD 66

Query: 70  LNTLPAHQRQVGMLFQDDWLFPHLNVWENLAFALP-NSIKGEQRKKNAYAALTKIALTEL 128
           L  LP ++R +G  FQ+  LFPH++V EN+AF L    +   +       AL ++ L+ L
Sbjct: 67  LTHLPPNKRNMGFGFQNYALFPHMSVAENVAFGLEMRKLPKAEIMAKVKTALDRVKLSHL 126

Query: 129 ACSFPEQISGGQRARISLMRMLLAEPKLVLLDEPFSKLDKALRSQFRDWVFNQLTSAGIP 188
           A   P+Q+SGGQ+ R++L R L+ EP ++LLDEP S LD  LR + +  +       GI 
Sbjct: 127 AERLPKQLSGGQQQRVALARALVIEPDVLLLDEPLSNLDAQLRHEMKTEIRTLQQQLGIT 186

Query: 189 TLMVTHDHED-VPVGSRVI 206
           T+ VTHD ++ + V  RV+
Sbjct: 187 TIFVTHDQDEALSVADRVV 205