Pairwise Alignments

Query, 220 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 329 a.a., spermidine/putrescine ABC transporter ATP-binding protein from Pseudomonas simiae WCS417

 Score =  135 bits (341), Expect = 7e-37
 Identities = 73/185 (39%), Positives = 107/185 (57%), Gaps = 4/185 (2%)

Query: 15  GHCLLAEFNLTIAEGEIVSLMGPSGCGKSTLLSVIAGHLATDFTFQGSMKLGDTQLNTLP 74
           G  + ++ N  +A+GE V+L+GPSGCGKSTLL  IAG  + D    G + L D  +  L 
Sbjct: 15  GTPVFSDINCEVAKGEFVTLLGPSGCGKSTLLRCIAGLTSVD---SGKILLDDQDIVPLS 71

Query: 75  AHQRQVGMLFQDDWLFPHLNVWENLAFALP-NSIKGEQRKKNAYAALTKIALTELACSFP 133
             +R +GM+FQ   LFP++ V +N+AF L    +  +   K     L  + L +LA  +P
Sbjct: 72  PQKRHIGMVFQSYALFPNMTVEQNVAFGLRMQKVNADDSHKRVQEVLQLVELKDLAGRYP 131

Query: 134 EQISGGQRARISLMRMLLAEPKLVLLDEPFSKLDKALRSQFRDWVFNQLTSAGIPTLMVT 193
            Q+SGGQ  R++L R L+  P+L+LLDEP S LD  +R   R+ +       G+ T+ VT
Sbjct: 132 HQMSGGQCQRVALARSLVTRPRLLLLDEPLSALDARIRKHLREQIRQIQRELGLTTIFVT 191

Query: 194 HDHED 198
           HD E+
Sbjct: 192 HDQEE 196