Pairwise Alignments

Query, 220 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 233 a.a., thiamine ABC transporter ATP-binding protein ThiQ from Erwinia tracheiphila SCR3

 Score =  132 bits (331), Expect = 7e-36
 Identities = 81/198 (40%), Positives = 114/198 (57%), Gaps = 7/198 (3%)

Query: 2   IFSLENLAILKQDGHCLLAEFNLTIAEGEIVSLMGPSGCGKSTLLSVIAGHLATDFTFQG 61
           + +L NL  + Q    L   F+L I  GE V+++GPSG GKSTLLS+IAG L  D    G
Sbjct: 1   MLTLNNLIWMYQH---LPMRFSLNIQAGEKVAILGPSGAGKSTLLSLIAGFLTAD---SG 54

Query: 62  SMKLGDTQLNTLPAHQRQVGMLFQDDWLFPHLNVWENLAFALPNSIKGEQRKKNAYAALT 121
           S++L   +    P  +R V MLFQ++ LFPHL V +N+   L   ++   ++K A  A+ 
Sbjct: 55  SLRLNGEEHAATPPARRPVSMLFQENNLFPHLTVEQNIGLGLHPGLRLNNQQKAALQAIV 114

Query: 122 K-IALTELACSFPEQISGGQRARISLMRMLLAEPKLVLLDEPFSKLDKALRSQFRDWVFN 180
           + + L +    FP+Q+SGGQR R +L R L+ +  ++LLDEPFS LD ALR +    V  
Sbjct: 115 RRVGLQDHLMRFPDQLSGGQRQRAALARCLVRQQPILLLDEPFSALDPALRQEMLLLVNE 174

Query: 181 QLTSAGIPTLMVTHDHED 198
                 I  LMV+H  ED
Sbjct: 175 VCEERNITLLMVSHSIED 192