Pairwise Alignments

Query, 566 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 278 a.a., ABC transporter permease subunit from Rhodanobacter sp000427505 FW510-R12

 Score = 72.0 bits (175), Expect = 3e-17
 Identities = 64/265 (24%), Positives = 120/265 (45%), Gaps = 8/265 (3%)

Query: 10  ILLCVAPILPGLAGVLISASGYLPVL--GHHHVSWQG-FSQVWQWQGVEYALLLSVTSTL 66
           +LL V P++     ++  ASG + +L  G     W+   +    W  + Y+  L+  + +
Sbjct: 5   LLLTVGPMVVAWIFMVAYASGGIGLLSTGWTLAHWRAALASGETWASIGYSFALAAVTMI 64

Query: 67  FSTYLALLMSFAILQRFWFHPRWKRIENSLSILLALPHVAFAIGFASLFASTGWLARLLY 126
            +  LA++   A+L     H R   + + L + LA+P +  A+    LF +TGWLAR L 
Sbjct: 65  VALGLAMIGQ-AVLGA---HARRGALGSLLFVPLAVPPLVAALLSIELFGNTGWLAR-LS 119

Query: 127 YGFELRDNSHEVTWLVHDPYAIGLTIALALKEVPFILLISLPILQQLNLTKMKMLSASLG 186
           +   L D   +   L+      G+ +       PF+ L+   +++   +  +  ++ +LG
Sbjct: 120 HAAGLIDRPDQFPALLFTRSGSGIVLTQVCLVAPFLWLLVDRLMRHARVADLGQVARTLG 179

Query: 187 YSEPQMWWKIVFPQWLRKIRFTLFAVAAYAISVVDFSLVLGPTTPPTFSVLVWQWFNEPD 246
            S  Q+W ++ FP  LR    T            +  L++G   P   S+L+ + F+  D
Sbjct: 180 ASSWQVWRRVTFPVVLRAGAPTFSVYFIVLAGAFEVPLMVGAQYPQVVSLLIQRKFDRFD 239

Query: 247 LNLLPRAASGAVVLLLLASIVLVAI 271
           L   P A + A +  ++A   L+A+
Sbjct: 240 LTSKPEAYAIAALYAVIAVTALLAL 264



 Score = 30.8 bits (68), Expect = 7e-05
 Identities = 25/112 (22%), Positives = 50/112 (44%), Gaps = 16/112 (14%)

Query: 443 SNFSKIARSLGKSEWQIFWKIKLPLLFPALLYAWAVGISVSLAQYLPTLMLGGGRLTTIT 502
           ++  ++AR+LG S WQ++ ++  P++  A    ++V   V    +   LM+G      + 
Sbjct: 169 ADLGQVARTLGASSWQVWRRVTFPVVLRAGAPTFSVYFIVLAGAFEVPLMVGAQYPQVV- 227

Query: 503 TEAVALSSGYDR-------RVTAIYALCQALLPFVFFSIALLLGRMQIHRYR 547
             ++ +   +DR          AI AL      +   ++  LL   + HR+R
Sbjct: 228 --SLLIQRKFDRFDLTSKPEAYAIAAL------YAVIAVTALLALFRWHRHR 271