Pairwise Alignments

Query, 566 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 274 a.a., polyamine ABC transporter permease from Pseudomonas simiae WCS417

 Score = 63.5 bits (153), Expect = 1e-14
 Identities = 64/258 (24%), Positives = 112/258 (43%), Gaps = 14/258 (5%)

Query: 301 LTLLFTISGAMIPLTLIWSLAQRWRFP-DLFPTQWTGQFWYD-EWPNVLHNMETSVLLAL 358
           L LLF I   ++ + L ++      +P   F   W   F+   EW   L N   SV++A 
Sbjct: 23  LILLFLILPVLVIIPLSFNSGSFLVYPLQGFSLHWYQDFFASAEWMRALKN---SVIVAP 79

Query: 359 GSGSLALLLGILAQEYRLHTQ---RAIPVYIIALPMLLPQLSLLFGIQVLTLLMASQAYT 415
            +  LA++ G LA           +A+ + ++  PM++P + +     +    +      
Sbjct: 80  AATVLAMVFGTLAAIGLTRGNFPGKALVMALVISPMVVPVVIIGVASYLFFAPLGLGNSF 139

Query: 416 WWVVWAHTFFAFPLVYLALSGPWQSYNSNFSKIARSLGKSEWQIFWKIKLPLLFPALLYA 475
           + ++  H     P V + +S   Q +N N  + A SLG S    F ++ LPL+ P ++  
Sbjct: 140 FSLIVVHAVLGVPFVIITVSATLQGFNHNLVRAAASLGASPLTAFRRVTLPLIAPGVISG 199

Query: 476 WAVGISVSLAQYLPTLMLGGGRLTTITTEAVALSSGYDRRVTAIYALCQALLPFVFFSIA 535
                S S  + + TL L G    T+  +   + SG    ++   A    LL  + FS+ 
Sbjct: 200 ALFAFSTSFDEVVVTLFLAGPEQATLPRQ---MFSGIRENLSPTIAAAATLL--IAFSVL 254

Query: 536 LLLGRMQIHRYRAAQLTT 553
           LLL  ++  R R+ +L T
Sbjct: 255 LLL-TLEWLRGRSEKLRT 271