Pairwise Alignments

Query, 566 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 256 a.a., spermidine/putrescine ABC transporter permease PotC from Vibrio cholerae E7946 ATCC 55056

 Score = 54.3 bits (129), Expect = 5e-12
 Identities = 40/166 (24%), Positives = 77/166 (46%), Gaps = 14/166 (8%)

Query: 330 FPTQWTGQFWYDEWPNVLHNMET-------SVLLALGSGSLALLLGILAQ----EYRLHT 378
           F  +W G  +  +W + L N ++       S+ +A+ S + A L+G L       Y+   
Sbjct: 34  FGIKWGG--FTTKWYHALMNNDSLMQAAWHSINVAVFSATAATLIGSLTAVALFRYQFKG 91

Query: 379 QRAIPVYIIALPMLLPQLSLLFGIQVLTLLMASQAYTWWVVWAHTFFAFPLVYLALSGPW 438
           ++ +   +  + M+ P + +   +  L L+M ++   + ++ AH  F  P V + +    
Sbjct: 92  KKVVSGMLFVV-MMSPDIVMAISLLALFLVMGAKLGFFTLLIAHITFCLPFVVVTVYTRL 150

Query: 439 QSYNSNFSKIARSLGKSEWQIFWKIKLPLLFPALLYAWAVGISVSL 484
             ++    + A+ LG  EW I  KI LPL  PA+   W +  ++SL
Sbjct: 151 NGFDVKMLEAAKDLGAGEWVILKKIILPLAKPAVAAGWLLSFTLSL 196