Pairwise Alignments

Query, 566 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 278 a.a., ABC transporter permease from Paraburkholderia sabiae LMG 24235

 Score = 63.2 bits (152), Expect = 1e-14
 Identities = 58/274 (21%), Positives = 117/274 (42%), Gaps = 15/274 (5%)

Query: 285 WQSSGR-SHFPLPHKSILTLLFTISGAMIPLTLIWSLAQRWRFPDLFPTQWTGQFWYDEW 343
           W   GR +H  L   S+  L+F IS  ++ + L ++    + +P           WY ++
Sbjct: 11  WGRLGRWAHVVL---SVAVLVFLISPILVVMPLSFNSQPYFTYP----MPGVSLRWYQDF 63

Query: 344 ---PNVLHNMETSVLLALGSGSLALLLGILAQEYRLHTQ---RAIPVYIIALPMLLPQLS 397
              P  +  ++ ++++ + S  LA  LG++A     H +   RA+   I+  PM++P + 
Sbjct: 64  LNSPEWMLALKNTLIVGVVSTLLATTLGVMASLGLTHPRLKGRALITGILVSPMIVPLII 123

Query: 398 LLFGIQVLTLLMASQAYTWWVVWAHTFFAFPLVYLALSGPWQSYNSNFSKIARSLGKSEW 457
              G+               ++ AH     P V + ++     +N   S+  RSLG S  
Sbjct: 124 TAVGVYFAFSPFGLVNSLTGLILAHAALGVPFVVVTVTATLAGFNETLSRAGRSLGASPM 183

Query: 458 QIFWKIKLPLLFPALLYAWAVGISVSLAQYLPTLMLGGGRLTTITTEAVA-LSSGYDRRV 516
           ++F ++KLP++ P ++       + S  + +  L L G    T+  +  A +       +
Sbjct: 184 RVFMQVKLPIIAPGVISGALFAFATSFDEIVVALFLTGTDQRTVPRQMWAGIREQLSPTI 243

Query: 517 TAIYALCQALLPFVFFSIALLLGRMQIHRYRAAQ 550
            A+ ++   +   +  ++ LL  R +  R  A Q
Sbjct: 244 LAVASVLVVISTLLLVTLELLRRRTERLRGTANQ 277