Pairwise Alignments

Query, 566 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 275 a.a., polyamine ABC transporter permease from Erwinia amylovora T8

 Score = 63.5 bits (153), Expect = 1e-14
 Identities = 53/210 (25%), Positives = 96/210 (45%), Gaps = 8/210 (3%)

Query: 303 LLFTISGAMIPLTLIWSLAQRWRFP-DLFPTQWTGQFWYD-EWPNVLHNMETSVLLALGS 360
           LLF I   +  + L ++ +    +P   F  +W   F++  EW   L N   S+L+A  +
Sbjct: 24  LLFLIVPVLTIVPLSFNASSFLSYPLSGFSLRWYQTFFHSQEWLGALGN---SLLIAPLA 80

Query: 361 GSLALLLGILAQEYRLHTQ---RAIPVYIIALPMLLPQLSLLFGIQVLTLLMASQAYTWW 417
             LA +LG++A    +  +   + + + II  PM+ P + +  G+      ++       
Sbjct: 81  TLLATVLGVMAAMGLVRGEFRGKGVVMAIIISPMVAPVVIIAVGMFFFFARLSLLNSYLG 140

Query: 418 VVWAHTFFAFPLVYLALSGPWQSYNSNFSKIARSLGKSEWQIFWKIKLPLLFPALLYAWA 477
           +V AH     P V + +    +SY++N S+ A SLG S  ++F K+ LPL+ P +     
Sbjct: 141 LVLAHALLGMPFVVITVMAVLKSYDTNLSRAAASLGASPLRVFRKVTLPLIAPGVFSGAL 200

Query: 478 VGISVSLAQYLPTLMLGGGRLTTITTEAVA 507
              + S  + + TL L      T+  +  A
Sbjct: 201 FAFAASFDEVVVTLFLASPSQRTLPIQMFA 230



 Score = 53.5 bits (127), Expect = 1e-11
 Identities = 74/284 (26%), Positives = 133/284 (46%), Gaps = 40/284 (14%)

Query: 10  ILLCVAPILPGLAGVLISASGYL--PVLGHHHVSWQGFSQVWQWQG-VEYALLLSVTSTL 66
           +L  + P+L  +  +  +AS +L  P+ G     +Q F    +W G +  +LL++  +TL
Sbjct: 24  LLFLIVPVLT-IVPLSFNASSFLSYPLSGFSLRWYQTFFHSQEWLGALGNSLLIAPLATL 82

Query: 67  FSTYLALLMSFAILQRFWFHPRWKRIENSLSIL-LALPHVAFAIGFASLFASTGWLARLL 125
            +T L ++ +  +++  +   R K +  ++ I  +  P V  A+G    FA    L    
Sbjct: 83  LATVLGVMAAMGLVRGEF---RGKGVVMAIIISPMVAPVVIIAVGMFFFFARLSLL---- 135

Query: 126 YYGFELRDNSHEVTWLVHDPYAIGLTIALALKEVPFILLISLPILQQLNLTKMKMLSASL 185
                   NS+           +GL +A AL  +PF+++  + +L+  + T +   +ASL
Sbjct: 136 --------NSY-----------LGLVLAHALLGMPFVVITVMAVLKSYD-TNLSRAAASL 175

Query: 186 GYSEPQMWWKIVFPQWLRKI-RFTLFAVAAYAISVVDFSLVLGPTTPPTFSVLVWQWFNE 244
           G S  +++ K+  P     +    LFA AA    VV  +L L   +  T  + ++    E
Sbjct: 176 GASPLRVFRKVTLPLIAPGVFSGALFAFAASFDEVV-VTLFLASPSQRTLPIQMFAGIRE 234

Query: 245 PDLNLLPRAASGAVVLLLLASIVLVAIVALEWLFTRGYRAWQSS 288
              NL P  A+ A  L++ AS+VL  ++ +E L  RG R  QS+
Sbjct: 235 ---NLDPTIAA-AASLMIGASLVL--LIVMEMLRRRGERMRQSA 272