Pairwise Alignments

Query, 566 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 509 a.a., ABC-type uncharacterized transport system, permease component from Enterobacter asburiae PDN3

 Score =  199 bits (505), Expect = 3e-55
 Identities = 176/547 (32%), Positives = 262/547 (47%), Gaps = 61/547 (11%)

Query: 7   WGFILLCVAPILPGLAGVLISASGYLPVLGHHHVSWQGFSQVWQWQGVEYALLLSVTSTL 66
           W  + +   PILP  AGV++ A    P L     +WQ      Q   +  A + ++ STL
Sbjct: 14  WLAMAVIYLPILP--AGVMLFA----PALSA--TNWQRLLNDPQ---LPQATVATLVSTL 62

Query: 67  FSTYLALLMSFAILQRFWFHPRWKRIENSLSILLALPHVAFAIGFASLFASTGWLARLLY 126
            +T  ALL++   +   W   RW+R+   L  LLA+PHVAFA     LF+  G   +L  
Sbjct: 63  IATLGALLIALFFVCLLWPGQRWRRLTTRLPWLLAIPHVAFATSALLLFSEGGLFYQLC- 121

Query: 127 YGFELRDNSHEVTWLVHDPYAIGLTIALALKEVPFILLISLPILQQLNLTKMKMLSASLG 186
                      V     D Y +GL + LA+KE  F+L     +L +  L + K++  + G
Sbjct: 122 ----------TVCTAPFDRYGVGLGLTLAVKESAFVLWAIYAVLPEQRLAQQKIVLQTFG 171

Query: 187 YSEPQMWWKIVFPQWLRKIRFTLFAVAAYAISVVDFSLVLGPTTPPTFSVLVWQWFNEPD 246
           Y   Q    ++ P     +   + AV A+++SVVD ++VLGP  PPT +VL +QW ++ D
Sbjct: 172 YGRIQTLSWLILPAIAPVLGAVMLAVLAWSLSVVDVAIVLGPGNPPTLAVLAFQWLSQGD 231

Query: 247 LNLLPRAASGAVVLLLLASIVLVAIVALEWLFTRGYRAWQSSGRSHFPLPH------KSI 300
                + A G ++ LLL  ++L A+ AL      GY  W++  R+   +P+      +S 
Sbjct: 232 AQ---QQAKGTLLCLLLL-MLLAALAAL------GYGLWKAWRRT---IPNLAGTRPRSP 278

Query: 301 LTLLFTISGAMIPLTLIWSLAQRWRFPDLFPTQWTGQFWYDEWPNVLHNMETSVLLALGS 360
           L L     G ++P   I   A       +   Q  G    D  P     + TS    L S
Sbjct: 279 LVLPERAFGGLLPACGILCAA-------VLLMQAQGG---DVGP-----VGTSFSFGLLS 323

Query: 361 GSLALLLGILAQEYRLHTQRAIPVYIIALPMLLPQLSLLFGIQVLTLLMASQAYTWWVVW 420
             +AL++  L  E+    QR   V++ + P+ LP L L+ G   + L +    +   V+W
Sbjct: 324 SLIALIVIFLWLEW--GPQRG-AVWVWS-PLALPALPLVTGQYFIALRLGLDGHYAAVLW 379

Query: 421 AHTFFAFPLVYLALSGPWQSYNSNFSKIARSLGKSEWQIFWKIKLPLLFPALLYAWAVGI 480
           +H  +  P + L L   W+  +      AR+LG    +IF  +K PLL    L A+A G 
Sbjct: 380 SHLLWVLPWMLLVLQPAWRRIDPRLILTARTLGWRRAKIFLLLKCPLLVRPALLAFATGF 439

Query: 481 SVSLAQYLPTLMLGGGRLTTITTEAVALSSGYDRRVTAIYALCQALLPFVFFSIALLLGR 540
           SVS+AQY+PTL LG GR  T+TTE VALSSG    V A  AL   L+    F +A L+ R
Sbjct: 440 SVSMAQYMPTLWLGAGRFATLTTETVALSSGGSIPVLASRALGLLLVTGTVFGLAALISR 499

Query: 541 MQIHRYR 547
           +   RYR
Sbjct: 500 L-AGRYR 505